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Issues list

Y25-071 - As a SSR (Liz C) I would like to be able to use the Bulk Sequencing Request page with the Element Aviti sequencer so that we can use the new sequencer. Element Aviti Phase 3
#4649 opened Jan 30, 2025 by TWJW-SANGER
17 tasks
Y25-070 - [BUG] NameError while printing Plate SQPP-71192-Q from Sequencescape in Training to aa212bc2 Bug Bug in code
#4648 opened Jan 30, 2025 by yoldas
Y25-060 - Placeholder to update Vue to 3.5 for Sequencescape
#4645 opened Jan 28, 2025 by yoldas
Y25-055 - Placeholder to update the host OS on the load balancer Enhancement New feature or request
#4643 opened Jan 27, 2025 by TWJW-SANGER
Y25-046 - Placeholder to update underlying OS to latest LTS
#4642 opened Jan 27, 2025 by TWJW-SANGER
Y25-039 - As TL (Tris B) I would like a "Loading" batch action page created for Element Aviti batches so that we can capture details specific to this process. Element Aviti Phase 3 Needs Refinement
#4632 opened Jan 21, 2025 by TWJW-SANGER
14 tasks
Y25-038 - As TL (Tris B) I would like a batch action "Confirm Element PhiX used" to be available on Aviti Element batches so that this step in the process is recorded. Element Aviti Phase 3 Needs Refinement
#4631 opened Jan 21, 2025 by TWJW-SANGER
4 tasks
Y25-037 - At a TL (Tris B) I would like to the actions on the batch page for Element Aviti sequencing batches to represent the workflow for these sequencers. Element Aviti Phase 3 Needs Refinement
#4630 opened Jan 21, 2025 by TWJW-SANGER
1 task
Y25-034 - [BUG] Exception (ActiveRecord::StatementInvalid) "Mysql2::Error: Table 'sequencescape_snapshot.labware' doesn't exist Bug Bug in code Size: S Small - low effort & risk Value: 3 Value to the insitute is average
#4624 opened Jan 20, 2025 by BenTopping
3 tasks
1
Y25-030 - As an Automation Specialist (Abdulrahman T) I want to be able to download a file for normalisation on the Beckman in the '16S RNA' pipeline so that we can perform QC. 16S RNA Need to Verify Needs Refinement Size: S Small - low effort & risk
#4620 opened Jan 17, 2025 by TWJW-SANGER
2 tasks
Y25-029 - As an Automation Specialist (Abdulrahman T) I want bed verifications performed on the '16S RNA' pipeline so that we can avoid plate swaps. 16S RNA Needs Refinement Size: S Small - low effort & risk
#4619 opened Jan 17, 2025 by TWJW-SANGER
3 tasks
Y25-028 - As a SSR (Liz C) I would like to be able to create and submit manifests for the '16S RNA' sequencing pipeline so that faculty can send samples to it. 16S RNA Needs Refinement Size: M Medium - medium effort & risk
#4618 opened Jan 17, 2025 by TWJW-SANGER
3 tasks
Y24-190 SS v2 Clean Up Tasks
#4617 opened Jan 17, 2025 by harrietc52
2 tasks
@harrietc52 @StephenHulme
Y24-190-4: API V2 Milestone 4
#4615 opened Jan 17, 2025 by StephenHulme
2
@harrietc52 @StephenHulme
2
Y25-024 - As a TL (Tris B) I would like SequenceScape to generate a Sample Sheet to load into the Element Aviti sequencer so that we can run it. Element Aviti Phase 3 Needs Refinement
#4606 opened Jan 15, 2025 by TWJW-SANGER
2 tasks
Y25-023 - As TL (Tris B) I would like batches sequenced on the Element Aviti to be marked complete when the Data QC complete API endpoint is called so that I can see they have completed. Element Aviti Phase 3 Needs Refinement
#4605 opened Jan 15, 2025 by TWJW-SANGER
2 tasks
Y25-022 - As a TL (Tris) I would like to be able to "Request Additional Sequencing" on a library on the Element Aviti sequencer so that we can use the new sequencer. Element Aviti Phase 3 Needs Refinement
#4604 opened Jan 15, 2025 by TWJW-SANGER
16 tasks
Y25-021 - As TL (Tris) I would like to have an "Element Aviti" pipeline page so that I can schedule and monitor batches on this new sequencer. Element Aviti Phase 3 Needs Refinement
#4603 opened Jan 15, 2025 by TWJW-SANGER
12 tasks
Y25-020 - As a TL (Tris B) I would like to be able to create a submission to perform Element Aviti sequencing on any pipeline on the Submissions page so that we can use the new sequencer. Element Aviti Phase 3 Needs Refinement
#4602 opened Jan 15, 2025 by TWJW-SANGER
14 tasks
Y25-005 - As a TL I would like to work through the 16S pipeline process map and build an initial backlog of user stories to support it in Limber. 16S RNA Research Research only
#4584 opened Jan 7, 2025 by TWJW-SANGER
3 tasks
Y25-004 - As Ya-Lin H I would like a SQL query created and tested that can run against the SequenceScape database and produce a table of creation times for plates with 'RVI RT' purpose so that we can report the start times for RVI pipeline process. RVI RVI project Sample Tracking Size: S Small - low effort & risk
#4583 opened Jan 6, 2025 by TWJW-SANGER
2 tasks
@BenTopping
4
Y25-003 - Additional basic validations for scRNA Core cDNA Prep submission scRNA - cDNA prep scRNA Size: S Small - low effort & risk
#4580 opened Jan 3, 2025 by yoldas
3 tasks
Y25-002 - [BUG] Duplicate Samples per Pool validations for scRNA cDNA Prep Submission Bug Bug in code scRNA - cDNA prep scRNA Size: S Small - low effort & risk
#4579 opened Jan 3, 2025 by yoldas
2 tasks
1
@wendyyang
3
Y24-525 - Tube rack manifests - research On Hold On hold Research Research only Tube Racks
#4572 opened Dec 18, 2024 by KatyTaylor
1 of 4 tasks
@KatyTaylor
2
Y24-524 - Refactor tube rack creation code On Hold On hold Technical Debt Tube Racks
#4571 opened Dec 18, 2024 by KatyTaylor
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