Skip to content

Sequence Data

Jump to bottom
Robert J. Gifford edited this page Oct 17, 2024 · 1 revision

Flu-GLUE defines 'master' reference genomes for all infuenzavirus species and subtypes.

Flu-GLUE

Overview & Installation

  1. Home
  2. Background
  3. Requirements
  4. Native Installation
  5. Docker Installation
  6. Usage

Flu Core Project

  1. Overview
  2. Database Schema
  3. Genome Features
  4. Sequence Data
  5. Alignment Tree
  6. Phylogenetic Trees
  7. Segment Recognition
  8. Genotyping Tools

Expanding the Dataset

  1. Background
  2. Filtering
  3. Filtering Process

Usage

  1. Sequences
  2. Alignments
  3. Mutation Frequencies

GLUE Framework

User Guide

  1. Project Data Model
  2. Schema Extensions
  3. Modules
  4. Alignments
  5. Variations
  6. Scripting Layer
  7. Freemarker Templates

Command Reference

  1. Command Mode Reference
  2. Mode Non-Specific Commands
  3. Module Type Reference
Clone this wiki locally