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13 Open 5 Closed
13 Open 5 Closed
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Issues list

Use mutations.py from bjorn proper and remove instance in this repo bug Something isn't working
#17 opened Nov 11, 2021 by kramesh1
@kramesh1
Create rejected fasta folder for biolab_genomics enhancement New feature or request
#16 opened Nov 10, 2021 by kramesh1
@kramesh1
Select for n-stretch in samples as further filtering metric enhancement New feature or request
#15 opened Nov 10, 2021 by kramesh1
@kramesh1
Reduce folder output to minimum required enhancement New feature or request
#14 opened Nov 1, 2021 by kramesh1
@kramesh1
Automate NCBI upload workflow kickoff enhancement New feature or request
#13 opened Oct 29, 2021 by kramesh1
@kramesh1
1
Update and formalize generating list of files that need to be uploaded to ncbi enhancement New feature or request high priority Features prioritized for next sprint
#12 opened Oct 28, 2021 by kramesh1
@kramesh1
Change samples column in output so files are alphabetical and ", " separated
#10 opened Oct 19, 2021 by kramesh1
@kramesh1
Resolve date formatting on output bug Something isn't working
#9 opened Oct 19, 2021 by kramesh1
@kramesh1
Merge genbank, SRA, and biosample IDs to HCoV-19-Genomics Metadata enhancement New feature or request high priority Features prioritized for next sprint
#8 opened Oct 18, 2021 by kramesh1
@kramesh1
3
Add semi-automated sequence filters during release workflow
#1 opened Sep 13, 2021 by kramesh1
@kramesh1
config.json is hardcoded in run for alab_release
#6 opened Sep 5, 2021 by kramesh1
@kramesh1
Halt flagging of changes in non-coding regions
#4 opened Aug 28, 2021 by kramesh1
@kramesh1
Automate interactions with metadata for release workflow enhancement New feature or request
#3 opened Aug 28, 2021 by kramesh1
@kramesh1
2
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