-
Notifications
You must be signed in to change notification settings - Fork 92
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
add mus mus domesticus demographic model #1485
Merged
petrelharp
merged 13 commits into
popsim-consortium:main
from
peterdfields:mus_mus_dem_history
Oct 17, 2023
Merged
Changes from all commits
Commits
Show all changes
13 commits
Select commit
Hold shift + click to select a range
f90f788
add mus mus dom model
peter-d-fields a38619f
small mod to syntax
peter-d-fields 20d0430
add mus musculus musculus demographic model
peter-d-fields 6ab7bc7
fix odd vscode related file naming
peter-d-fields 5ccf682
fix first name, add parameter table
peter-d-fields b496de4
add second parameter table
peter-d-fields 6f9822d
add castaneous demographic model and parameter table
peter-d-fields 14d28c9
added information about source of model data
peter-d-fields abc45cb
fix time intervals in history and parameter table files
peter-d-fields 51386ba
Merge branch 'popsim-consortium:main' into mus_mus_dem_history
peterdfields 0cf42b0
fix time, size intervals based on Ilan's suggestions
peter-d-fields 408af33
Merge branch 'popsim-consortium:main' into mus_mus_dem_history
peterdfields 6720d15
add table values to match published demographic models
peter-d-fields File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,116 @@ | ||
| Population size,344802,Ancestral population size | ||
| Population size,344802,Pop. size during 1st time interval | ||
| Population size,344802,Pop. size during 2nd time interval | ||
| Population size,344802,Pop. size during 3rd time interval | ||
| Population size,463464,Pop. size during 4th time interval | ||
| Population size,463464,Pop. size during 5th time interval | ||
| Population size,360433,Pop. size during 6th time interval | ||
| Population size,275733,Pop. size during 7th time interval | ||
| Population size,217017,Pop. size during 8th time interval | ||
| Population size,182054,Pop. size during 9th time interval | ||
| Population size,163295,Pop. size during 10th time interval | ||
| Population size,155027,Pop. size during 11th time interval | ||
| Population size,154098,Pop. size during 12th time interval | ||
| Population size,159139,Pop. size during 13th time interval | ||
| Population size,169657,Pop. size during 14th time interval | ||
| Population size,185260,Pop. size during 15th time interval | ||
| Population size,205098,Pop. size during 16th time interval | ||
| Population size,227605,Pop. size during 17th time interval | ||
| Population size,250544,Pop. size during 18th time interval | ||
| Population size,271326,Pop. size during 19th time interval | ||
| Population size,287572,Pop. size during 20th time interval | ||
| Population size,297772,Pop. size during 21th time interval | ||
| Population size,301783,Pop. size during 22th time interval | ||
| Population size,300840,Pop. size during 23th time interval | ||
| Population size,297138,Pop. size during 24th time interval | ||
| Population size,293233,Pop. size during 25th time interval | ||
| Population size,291560,Pop. size during 26th time interval | ||
| Population size,294117,Pop. size during 27th time interval | ||
| Population size,302369,Pop. size during 28th time interval | ||
| Population size,317235,Pop. size during 29th time interval | ||
| Population size,338818,Pop. size during 30th time interval | ||
| Population size,365787,Pop. size during 31th time interval | ||
| Population size,394606,Pop. size during 32th time interval | ||
| Population size,418882,Pop. size during 33th time interval | ||
| Population size,429975,Pop. size during 34th time interval | ||
| Population size,420389,Pop. size during 35th time interval | ||
| Population size,388298,Pop. size during 36th time interval | ||
| Population size,338426,Pop. size during 37th time interval | ||
| Population size,279816,Pop. size during 38th time interval | ||
| Population size,222464,Pop. size during 39th time interval | ||
| Population size,173419,Pop. size during 40th time interval | ||
| Population size,134861,Pop. size during 41th time interval | ||
| Population size,105533,Pop. size during 42th time interval | ||
| Population size,83216,Pop. size during 43th time interval | ||
| Population size,66260,Pop. size during 44th time interval | ||
| Population size,53747,Pop. size during 45th time interval | ||
| Population size,45372,Pop. size during 46th time interval | ||
| Population size,41297,Pop. size during 47th time interval | ||
| Population size,41845,Pop. size during 48th time interval | ||
| Population size,47736,Pop. size during 49th time interval | ||
| Population size,60911,Pop. size during 50th time interval | ||
| Population size,86633,Pop. size during 51th time interval | ||
| Population size,141377,Pop. size during 52th time interval | ||
| Population size,291323,Pop. size during 53th time interval | ||
| Population size,938111,Pop. size during 54th time interval | ||
| Population size,5064712,Pop. size during 55th time interval | ||
| Population size,64853,Pop. size during 56th time interval | ||
| Time (yrs.),5585000,Begining of 1st time interval | ||
| Time (yrs.),4955842,Begining of 2nd time interval | ||
| Time (yrs.),4397456,Begining of 3rd time interval | ||
| Time (yrs.),3901912,Begining of 4th time interval | ||
| Time (yrs.),3462105,Begining of 5th time interval | ||
| Time (yrs.),3071789,Begining of 6th time interval | ||
| Time (yrs.),2725404,Begining of 7th time interval | ||
| Time (yrs.),2417965,Begining of 8th time interval | ||
| Time (yrs.),2145140,Begining of 9th time interval | ||
| Time (yrs.),1903000,Begining of 10th time interval | ||
| Time (yrs.),1688102,Begining of 11th time interval | ||
| Time (yrs.),1497384,Begining of 12th time interval | ||
| Time (yrs.),1328123,Begining of 13th time interval | ||
| Time (yrs.),1177907,Begining of 14th time interval | ||
| Time (yrs.),1044593,Begining of 15th time interval | ||
| Time (yrs.),926277,Begining of 16th time interval | ||
| Time (yrs.),821274,Begining of 17th time interval | ||
| Time (yrs.),728084,Begining of 18th time interval | ||
| Time (yrs.),645379,Begining of 19th time interval | ||
| Time (yrs.),571979,Begining of 20th time interval | ||
| Time (yrs.),506839,Begining of 21th time interval | ||
| Time (yrs.),449026,Begining of 22th time interval | ||
| Time (yrs.),397719,Begining of 23th time interval | ||
| Time (yrs.),352184,Begining of 24th time interval | ||
| Time (yrs.),311772,Begining of 25th time interval | ||
| Time (yrs.),275907,Begining of 26th time interval | ||
| Time (yrs.),244079,Begining of 27th time interval | ||
| Time (yrs.),215830,Begining of 28th time interval | ||
| Time (yrs.),190760,Begining of 29th time interval | ||
| Time (yrs.),168510,Begining of 30th time interval | ||
| Time (yrs.),148764,Begining of 31th time interval | ||
| Time (yrs.),131239,Begining of 32th time interval | ||
| Time (yrs.),115687,Begining of 33th time interval | ||
| Time (yrs.),101884,Begining of 34th time interval | ||
| Time (yrs.),89634,Begining of 35th time interval | ||
| Time (yrs.),78762,Begining of 36th time interval | ||
| Time (yrs.),69114,Begining of 37th time interval | ||
| Time (yrs.),60551,Begining of 38th time interval | ||
| Time (yrs.),52951,Begining of 39th time interval | ||
| Time (yrs.),46207,Begining of 40th time interval | ||
| Time (yrs.),40221,Begining of 41th time interval | ||
| Time (yrs.),34909,Begining of 42th time interval | ||
| Time (yrs.),30195,Begining of 43th time interval | ||
| Time (yrs.),26011,Begining of 44th time interval | ||
| Time (yrs.),22297,Begining of 45th time interval | ||
| Time (yrs.),19002,Begining of 46th time interval | ||
| Time (yrs.),16077,Begining of 47th time interval | ||
| Time (yrs.),13481,Begining of 48th time interval | ||
| Time (yrs.),11178,Begining of 49th time interval | ||
| Time (yrs.),9133,Begining of 50th time interval | ||
| Time (yrs.),7319,Begining of 51th time interval | ||
| Time (yrs.),5709,Begining of 52th time interval | ||
| Time (yrs.),4279,Begining of 53th time interval | ||
| Time (yrs.),3011,Begining of 54th time interval | ||
| Time (yrs.),1886,Begining of 55th time interval | ||
| Time (yrs.),887,Begining of 56th time interval | ||
| Time (yrs.),0,Begining of 57th time interval | ||
| Generation time (yrs.),1,Average generation interval | ||
| Mutation rate,5.7e-9,Per-base per-generation mutation rate |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,116 @@ | ||
| Population size,133912,Ancestral population size | ||
| Population size,133912,Pop. size during 1st time interval | ||
| Population size,133912,Pop. size during 2nd time interval | ||
| Population size,133912,Pop. size during 3rd time interval | ||
| Population size,98811,Pop. size during 4th time interval | ||
| Population size,98811,Pop. size during 5th time interval | ||
| Population size,131050,Pop. size during 6th time interval | ||
| Population size,173594,Pop. size during 7th time interval | ||
| Population size,227037,Pop. size during 8th time interval | ||
| Population size,279833,Pop. size during 9th time interval | ||
| Population size,316861,Pop. size during 10th time interval | ||
| Population size,327217,Pop. size during 11th time interval | ||
| Population size,309961,Pop. size during 12th time interval | ||
| Population size,271935,Pop. size during 13th time interval | ||
| Population size,222951,Pop. size during 14th time interval | ||
| Population size,173264,Pop. size during 15th time interval | ||
| Population size,131392,Pop. size during 16th time interval | ||
| Population size,101471,Pop. size during 17th time interval | ||
| Population size,82953,Pop. size during 18th time interval | ||
| Population size,73097,Pop. size during 19th time interval | ||
| Population size,69317,Pop. size during 20th time interval | ||
| Population size,69939,Pop. size during 21th time interval | ||
| Population size,74185,Pop. size during 22th time interval | ||
| Population size,81892,Pop. size during 23th time interval | ||
| Population size,93046,Pop. size during 24th time interval | ||
| Population size,107067,Pop. size during 25th time interval | ||
| Population size,121751,Pop. size during 26th time interval | ||
| Population size,132063,Pop. size during 27th time interval | ||
| Population size,131016,Pop. size during 28th time interval | ||
| Population size,115426,Pop. size during 29th time interval | ||
| Population size,90926,Pop. size during 30th time interval | ||
| Population size,67337,Pop. size during 31th time interval | ||
| Population size,50557,Pop. size during 32th time interval | ||
| Population size,41195,Pop. size during 33th time interval | ||
| Population size,36886,Pop. size during 34th time interval | ||
| Population size,34163,Pop. size during 35th time interval | ||
| Population size,29931,Pop. size during 36th time interval | ||
| Population size,23419,Pop. size during 37th time interval | ||
| Population size,16490,Pop. size during 38th time interval | ||
| Population size,11240,Pop. size during 39th time interval | ||
| Population size,8332,Pop. size during 40th time interval | ||
| Population size,7480,Pop. size during 41th time interval | ||
| Population size,8463,Pop. size during 42th time interval | ||
| Population size,11758,Pop. size during 43th time interval | ||
| Population size,18939,Pop. size during 44th time interval | ||
| Population size,33028,Pop. size during 45th time interval | ||
| Population size,58488,Pop. size during 46th time interval | ||
| Population size,97250,Pop. size during 47th time interval | ||
| Population size,136620,Pop. size during 48th time interval | ||
| Population size,159142,Pop. size during 49th time interval | ||
| Population size,147212,Pop. size during 50th time interval | ||
| Population size,115399,Pop. size during 51th time interval | ||
| Population size,111242,Pop. size during 52th time interval | ||
| Population size,145603,Pop. size during 53th time interval | ||
| Population size,90428,Pop. size during 54th time interval | ||
| Population size,3844,Pop. size during 55th time interval | ||
| Population size,2040,Pop. size during 56th time interval | ||
| Time (yrs.),1915544,Begining of 1st time interval | ||
| Time (yrs.),1654653,Begining of 2nd time interval | ||
| Time (yrs.),1429281,Begining of 3rd time interval | ||
| Time (yrs.),1234595,Begining of 4th time interval | ||
| Time (yrs.),1066418,Begining of 5th time interval | ||
| Time (yrs.),921140,Begining of 6th time interval | ||
| Time (yrs.),795646,Begining of 7th time interval | ||
| Time (yrs.),687237,Begining of 8th time interval | ||
| Time (yrs.),593589,Begining of 9th time interval | ||
| Time (yrs.),512693,Begining of 10th time interval | ||
| Time (yrs.),442812,Begining of 11th time interval | ||
| Time (yrs.),382446,Begining of 12th time interval | ||
| Time (yrs.),330300,Begining of 13th time interval | ||
| Time (yrs.),285254,Begining of 14th time interval | ||
| Time (yrs.),246340,Begining of 15th time interval | ||
| Time (yrs.),212726,Begining of 16th time interval | ||
| Time (yrs.),183689,Begining of 17th time interval | ||
| Time (yrs.),158606,Begining of 18th time interval | ||
| Time (yrs.),136938,Begining of 19th time interval | ||
| Time (yrs.),118221,Begining of 20th time interval | ||
| Time (yrs.),102052,Begining of 21th time interval | ||
| Time (yrs.),88084,Begining of 22th time interval | ||
| Time (yrs.),76019,Begining of 23th time interval | ||
| Time (yrs.),65596,Begining of 24th time interval | ||
| Time (yrs.),56592,Begining of 25th time interval | ||
| Time (yrs.),48815,Begining of 26th time interval | ||
| Time (yrs.),42096,Begining of 27th time interval | ||
| Time (yrs.),36292,Begining of 28th time interval | ||
| Time (yrs.),31279,Begining of 29th time interval | ||
| Time (yrs.),26948,Begining of 30th time interval | ||
| Time (yrs.),23207,Begining of 31th time interval | ||
| Time (yrs.),19975,Begining of 32th time interval | ||
| Time (yrs.),17183,Begining of 33th time interval | ||
| Time (yrs.),14772,Begining of 34th time interval | ||
| Time (yrs.),12688,Begining of 35th time interval | ||
| Time (yrs.),10889,Begining of 36th time interval | ||
| Time (yrs.),9334,Begining of 37th time interval | ||
| Time (yrs.),7991,Begining of 38th time interval | ||
| Time (yrs.),6831,Begining of 39th time interval | ||
| Time (yrs.),5829,Begining of 40th time interval | ||
| Time (yrs.),4964,Begining of 41th time interval | ||
| Time (yrs.),4216,Begining of 42th time interval | ||
| Time (yrs.),3570,Begining of 43th time interval | ||
| Time (yrs.),3012,Begining of 44th time interval | ||
| Time (yrs.),2530,Begining of 45th time interval | ||
| Time (yrs.),2114,Begining of 46th time interval | ||
| Time (yrs.),1754,Begining of 47th time interval | ||
| Time (yrs.),1443,Begining of 48th time interval | ||
| Time (yrs.),1175,Begining of 49th time interval | ||
| Time (yrs.),943,Begining of 50th time interval | ||
| Time (yrs.),743,Begining of 51th time interval | ||
| Time (yrs.),570,Begining of 52th time interval | ||
| Time (yrs.),420,Begining of 53th time interval | ||
| Time (yrs.),291,Begining of 54th time interval | ||
| Time (yrs.),180,Begining of 55th time interval | ||
| Time (yrs.),83,Begining of 56th time interval | ||
| Time (yrs.),0,Begining of 57th time interval | ||
| Generation time (yrs.),1,Average generation interval | ||
| Mutation rate,5.7e-9,Per-base per-generation mutation rate | ||
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,116 @@ | ||
| Population size,152757,Ancestral population size | ||
| Population size,152757,Pop. size during 1st time interval | ||
| Population size,152757,Pop. size during 2nd time interval | ||
| Population size,152757,Pop. size during 3rd time interval | ||
| Population size,407105,Pop. size during 4th time interval | ||
| Population size,407105,Pop. size during 5th time interval | ||
| Population size,400867,Pop. size during 6th time interval | ||
| Population size,359368,Pop. size during 7th time interval | ||
| Population size,302950,Pop. size during 8th time interval | ||
| Population size,245823,Pop. size during 9thtime interval | ||
| Population size,194969,Pop. size during 10th time interval | ||
| Population size,151909,Pop. size during 11th time interval | ||
| Population size,116547,Pop. size during 12th time interval | ||
| Population size,88494,Pop. size during 13th time interval | ||
| Population size,67725,Pop. size during 14th time interval | ||
| Population size,54304,Pop. size during 15th time interval | ||
| Population size,47001,Pop. size during 16th time interval | ||
| Population size,43933,Pop. size during 17th time interval | ||
| Population size,43467,Pop. size during 18th time interval | ||
| Population size,43874,Pop. size during 19th time interval | ||
| Population size,42857,Pop. size during 20th time interval | ||
| Population size,38441,Pop. size during 21th time interval | ||
| Population size,30806,Pop. size during 22th time interval | ||
| Population size,22556,Pop. size during 23th time interval | ||
| Population size,16339,Pop. size during 24th time interval | ||
| Population size,13023,Pop. size during 25th time interval | ||
| Population size,12259,Pop. size during 26th time interval | ||
| Population size,13588,Pop. size during 27th time interval | ||
| Population size,16747,Pop. size during 28th time interval | ||
| Population size,21219,Pop. size during 29th time interval | ||
| Population size,25399,Pop. size during 30th time interval | ||
| Population size,26648,Pop. size during 31th time interval | ||
| Population size,23546,Pop. size during 32th time interval | ||
| Population size,17741,Pop. size during 33th time interval | ||
| Population size,12072,Pop. size during 34th time interval | ||
| Population size,7990,Pop. size during 35th time interval | ||
| Population size,5506,Pop. size during 36th time interval | ||
| Population size,4177,Pop. size during 37th time interval | ||
| Population size,3643,Pop. size during 38th time interval | ||
| Population size,3751,Pop. size during 39th time interval | ||
| Population size,4605,Pop. size during 40th time interval | ||
| Population size,6695,Pop. size during 41th time interval | ||
| Population size,11222,Pop. size during 42th time interval | ||
| Population size,20382,Pop. size during 43th time interval | ||
| Population size,36220,Pop. size during 44th time interval | ||
| Population size,55959,Pop. size during 45th time interval | ||
| Population size,68111,Pop. size during 46th time interval | ||
| Population size,61935,Pop. size during 47th time interval | ||
| Population size,42715,Pop. size during 48th time interval | ||
| Population size,25527,Pop. size during 49th time interval | ||
| Population size,16254,Pop. size during 50th time interval | ||
| Population size,12104,Pop. size during 51th time interval | ||
| Population size,9960,Pop. size during 52th time interval | ||
| Population size,9029,Pop. size during 53th time interval | ||
| Population size,8035,Pop. size during 54th time interval | ||
| Population size,8931,Pop. size during 55th time interval | ||
| Population size,179912,Pop. size during 56th time interval | ||
| Time (yrs.),807711,Begining of 1st time interval | ||
| Time (yrs.),697702,Begining of 2nd time interval | ||
| Time (yrs.),602670,Begining of 3rd time interval | ||
| Time (yrs.),520579,Begining of 4th time interval | ||
| Time (yrs.),449667,Begining of 5th time interval | ||
| Time (yrs.),388409,Begining of 6th time interval | ||
| Time (yrs.),335491,Begining of 7th time interval | ||
| Time (yrs.),289781,Begining of 8th time interval | ||
| Time (yrs.),250293,Begining of 9th time interval | ||
| Time (yrs.),216182,Begining of 10th time interval | ||
| Time (yrs.),186716,Begining of 11th time interval | ||
| Time (yrs.),161262,Begining of 12th time interval | ||
| Time (yrs.),139274,Begining of 13th time interval | ||
| Time (yrs.),120280,Begining of 14th time interval | ||
| Time (yrs.),103872,Begining of 15th time interval | ||
| Time (yrs.),89698,Begining of 16th time interval | ||
| Time (yrs.),77455,Begining of 17th time interval | ||
| Time (yrs.),66878,Begining of 18th time interval | ||
| Time (yrs.),57741,Begining of 19th time interval | ||
| Time (yrs.),49849,Begining of 20th time interval | ||
| Time (yrs.),43031,Begining of 21th time interval | ||
| Time (yrs.),37142,Begining of 22th time interval | ||
| Time (yrs.),32054,Begining of 23th time interval | ||
| Time (yrs.),27659,Begining of 24th time interval | ||
| Time (yrs.),23863,Begining of 25th time interval | ||
| Time (yrs.),20583,Begining of 26th time interval | ||
| Time (yrs.),17750,Begining of 27th time interval | ||
| Time (yrs.),15303,Begining of 28th time interval | ||
| Time (yrs.),13189,Begining of 29th time interval | ||
| Time (yrs.),11363,Begining of 30th time interval | ||
| Time (yrs.),9785,Begining of 31th time interval | ||
| Time (yrs.),8423,Begining of 32th time interval | ||
| Time (yrs.),7246,Begining of 33th time interval | ||
| Time (yrs.),6229,Begining of 34th time interval | ||
| Time (yrs.),5350,Begining of 35th time interval | ||
| Time (yrs.),4591,Begining of 36th time interval | ||
| Time (yrs.),3936,Begining of 37th time interval | ||
| Time (yrs.),3370,Begining of 38th time interval | ||
| Time (yrs.),2881,Begining of 39th time interval | ||
| Time (yrs.),2458,Begining of 40th time interval | ||
| Time (yrs.),2093,Begining of 41th time interval | ||
| Time (yrs.),1778,Begining of 42th time interval | ||
| Time (yrs.),1505,Begining of 43th time interval | ||
| Time (yrs.),1270,Begining of 44th time interval | ||
| Time (yrs.),1067,Begining of 45th time interval | ||
| Time (yrs.),891,Begining of 46th time interval | ||
| Time (yrs.),740,Begining of 47th time interval | ||
| Time (yrs.),609,Begining of 48th time interval | ||
| Time (yrs.),495,Begining of 49th time interval | ||
| Time (yrs.),398,Begining of 50th time interval | ||
| Time (yrs.),313,Begining of 51th time interval | ||
| Time (yrs.),240,Begining of 52th time interval | ||
| Time (yrs.),177,Begining of 53th time interval | ||
| Time (yrs.),123,Begining of 54th time interval | ||
| Time (yrs.),76,Begining of 55th time interval | ||
| Time (yrs.),35,Begining of 56th time interval | ||
| Time (yrs.),0,Begining of 57th time interval | ||
| Generation time (yrs.),1,Average generation interval | ||
| Mutation rate,5.7e-9,Per-base per-generation mutation rate |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Parameter table looks okay. I think that the standard is to have one more entry in the list of Nes than in the list of times. This should correspond to the Ne before the first time interval (the ancestral Ne). Other Nes should map to time intervals. This also relates to my comment on the "shift" in the demographic model