GitHub - pni-data/TRR289_A01_COLA_MRT: Project A01 - PI: Ulrike Bingel (Universität Duisburg-Essen)

[email protected] �[33m1: [WARN] Not all subjects contain the same files. Each subject should contain the same number of files with the same naming unless some files are known to be missing. (code: 38 - INCONSISTENT_SUBJECTS)�[39m ./sub-001/fmap/sub-001_acq-test_dir-PA_run-02_epi.json Evidence: Subject: sub-001; Missing file: sub-001_acq-test_dir-PA_run-02_epi.json ./sub-001/fmap/sub-001_acq-test_dir-PA_run-02_epi.nii.gz Evidence: Subject: sub-001; Missing file: sub-001_acq-test_dir-PA_run-02_epi.nii.gz ./sub-001/fmap/sub-001_acq-test_run-02_magnitude1.json Evidence: Subject: sub-001; Missing file: sub-001_acq-test_run-02_magnitude1.json ./sub-001/fmap/sub-001_acq-test_run-02_magnitude1.nii.gz Evidence: Subject: sub-001; Missing file: sub-001_acq-test_run-02_magnitude1.nii.gz ./sub-001/fmap/sub-001_acq-test_run-02_magnitude2.json Evidence: Subject: sub-001; Missing file: sub-001_acq-test_run-02_magnitude2.json ./sub-001/fmap/sub-001_acq-test_run-02_magnitude2.nii.gz Evidence: Subject: sub-001; Missing file: sub-001_acq-test_run-02_magnitude2.nii.gz ./sub-001/fmap/sub-001_acq-test_run-02_phasediff.json Evidence: Subject: sub-001; Missing file: sub-001_acq-test_run-02_phasediff.json ./sub-001/fmap/sub-001_acq-test_run-02_phasediff.nii.gz Evidence: Subject: sub-001; Missing file: sub-001_acq-test_run-02_phasediff.nii.gz ./sub-001/func/sub-001_task-cond_run-02_bold.json Evidence: Subject: sub-001; Missing file: sub-001_task-cond_run-02_bold.json ./sub-001/func/sub-001_task-cond_run-02_bold.nii.gz Evidence: Subject: sub-001; Missing file: sub-001_task-cond_run-02_bold.nii.gz �[33m... and 1243 more files having this issue (Use --verbose to see them all).�[39m

�[36m Please visit https://neurostars.org/search?q=INCONSISTENT_SUBJECTS for existing conversations about this issue.�[39m

�[33m2: [WARN] Not all subjects/sessions/runs have the same scanning parameters. (code: 39 - INCONSISTENT_PARAMETERS)�[39m
	./sub-001/func/sub-001_task-cond_run-01_bold.nii.gz
	./sub-001/func/sub-001_task-test_run-01_bold.nii.gz
	./sub-002/func/sub-002_task-test_run-01_bold.nii.gz
	./sub-003/func/sub-003_task-cond_run-01_bold.nii.gz
	./sub-003/func/sub-003_task-test_run-01_bold.nii.gz
	./sub-004/func/sub-004_task-cond_run-01_bold.nii.gz
	./sub-004/func/sub-004_task-test_run-01_bold.nii.gz
	./sub-005/func/sub-005_task-cond_run-01_bold.nii.gz
	./sub-005/func/sub-005_task-test_run-01_bold.nii.gz
	./sub-006/func/sub-006_task-cond_run-01_bold.nii.gz
	�[33m... and 140 more files having this issue (Use --verbose to see them all).�[39m

�[36m Please visit https://neurostars.org/search?q=INCONSISTENT_PARAMETERS for existing conversations about this issue.�[39m

�[33m3: [WARN] Tabular file contains custom columns not described in a data dictionary (code: 82 - CUSTOM_COLUMN_WITHOUT_DESCRIPTION)�[39m
	./sub-001/func/sub-001_task-cond_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-cond_events.json,/run-01_events.json,/task-cond_run-01_events.json,/sub-001/sub-001_events.json,/sub-001/sub-001_task-cond_events.json,/sub-001/sub-001_run-01_events.json,/sub-001/sub-001_task-cond_run-01_events.json,/sub-001/func/sub-001_events.json,/sub-001/func/sub-001_task-cond_events.json,/sub-001/func/sub-001_run-01_events.json,/sub-001/func/sub-001_task-cond_run-01_events.json
	./sub-001/func/sub-001_task-rest_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-rest_events.json,/run-01_events.json,/task-rest_run-01_events.json,/sub-001/sub-001_events.json,/sub-001/sub-001_task-rest_events.json,/sub-001/sub-001_run-01_events.json,/sub-001/sub-001_task-rest_run-01_events.json,/sub-001/func/sub-001_events.json,/sub-001/func/sub-001_task-rest_events.json,/sub-001/func/sub-001_run-01_events.json,/sub-001/func/sub-001_task-rest_run-01_events.json
	./sub-001/func/sub-001_task-test_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-test_events.json,/run-01_events.json,/task-test_run-01_events.json,/sub-001/sub-001_events.json,/sub-001/sub-001_task-test_events.json,/sub-001/sub-001_run-01_events.json,/sub-001/sub-001_task-test_run-01_events.json,/sub-001/func/sub-001_events.json,/sub-001/func/sub-001_task-test_events.json,/sub-001/func/sub-001_run-01_events.json,/sub-001/func/sub-001_task-test_run-01_events.json
	./sub-002/func/sub-002_task-cond_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-cond_events.json,/run-01_events.json,/task-cond_run-01_events.json,/sub-002/sub-002_events.json,/sub-002/sub-002_task-cond_events.json,/sub-002/sub-002_run-01_events.json,/sub-002/sub-002_task-cond_run-01_events.json,/sub-002/func/sub-002_events.json,/sub-002/func/sub-002_task-cond_events.json,/sub-002/func/sub-002_run-01_events.json,/sub-002/func/sub-002_task-cond_run-01_events.json
	./sub-002/func/sub-002_task-rest_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-rest_events.json,/run-01_events.json,/task-rest_run-01_events.json,/sub-002/sub-002_events.json,/sub-002/sub-002_task-rest_events.json,/sub-002/sub-002_run-01_events.json,/sub-002/sub-002_task-rest_run-01_events.json,/sub-002/func/sub-002_events.json,/sub-002/func/sub-002_task-rest_events.json,/sub-002/func/sub-002_run-01_events.json,/sub-002/func/sub-002_task-rest_run-01_events.json
	./sub-002/func/sub-002_task-test_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-test_events.json,/run-01_events.json,/task-test_run-01_events.json,/sub-002/sub-002_events.json,/sub-002/sub-002_task-test_events.json,/sub-002/sub-002_run-01_events.json,/sub-002/sub-002_task-test_run-01_events.json,/sub-002/func/sub-002_events.json,/sub-002/func/sub-002_task-test_events.json,/sub-002/func/sub-002_run-01_events.json,/sub-002/func/sub-002_task-test_run-01_events.json
	./sub-003/func/sub-003_task-cond_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-cond_events.json,/run-01_events.json,/task-cond_run-01_events.json,/sub-003/sub-003_events.json,/sub-003/sub-003_task-cond_events.json,/sub-003/sub-003_run-01_events.json,/sub-003/sub-003_task-cond_run-01_events.json,/sub-003/func/sub-003_events.json,/sub-003/func/sub-003_task-cond_events.json,/sub-003/func/sub-003_run-01_events.json,/sub-003/func/sub-003_task-cond_run-01_events.json
	./sub-003/func/sub-003_task-rest_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-rest_events.json,/run-01_events.json,/task-rest_run-01_events.json,/sub-003/sub-003_events.json,/sub-003/sub-003_task-rest_events.json,/sub-003/sub-003_run-01_events.json,/sub-003/sub-003_task-rest_run-01_events.json,/sub-003/func/sub-003_events.json,/sub-003/func/sub-003_task-rest_events.json,/sub-003/func/sub-003_run-01_events.json,/sub-003/func/sub-003_task-rest_run-01_events.json
	./sub-003/func/sub-003_task-test_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-test_events.json,/run-01_events.json,/task-test_run-01_events.json,/sub-003/sub-003_events.json,/sub-003/sub-003_task-test_events.json,/sub-003/sub-003_run-01_events.json,/sub-003/sub-003_task-test_run-01_events.json,/sub-003/func/sub-003_events.json,/sub-003/func/sub-003_task-test_events.json,/sub-003/func/sub-003_run-01_events.json,/sub-003/func/sub-003_task-test_run-01_events.json
	./sub-004/func/sub-004_task-cond_run-01_events.tsv
		Evidence: Columns: TODO -- fill in rows and add more tab-separated columns if desired not defined, please define in: /events.json, /task-cond_events.json,/run-01_events.json,/task-cond_run-01_events.json,/sub-004/sub-004_events.json,/sub-004/sub-004_task-cond_events.json,/sub-004/sub-004_run-01_events.json,/sub-004/sub-004_task-cond_run-01_events.json,/sub-004/func/sub-004_events.json,/sub-004/func/sub-004_task-cond_events.json,/sub-004/func/sub-004_run-01_events.json,/sub-004/func/sub-004_task-cond_run-01_events.json
	�[33m... and 227 more files having this issue (Use --verbose to see them all).�[39m

�[36m Please visit https://neurostars.org/search?q=CUSTOM_COLUMN_WITHOUT_DESCRIPTION for existing conversations about this issue.�[39m

�[33m4: [WARN] The recommended file /README is very small. Please consider expanding it with additional information about the dataset. (code: 213 - README_FILE_SMALL)�[39m
	./README

�[36m Please visit https://neurostars.org/search?q=README_FILE_SMALL for existing conversations about this issue.�[39m

    �[34m�[4mSummary:�[24m�[39m                    �[34m�[4mAvailable Tasks:�[24m�[39m                     �[34m�[4mAvailable Modalities:�[39m�[24m 
    3748 Files, 132.62GB        cond                                 MRI                   
    78 - Subjects               rest                                                       
    1 - Session                 test                                                       
                                Conditioning                                               
                                Test                                                       
                                TODO: full task name for rest

�[36m If you have any questions, please post on https://neurostars.org/tags/bids.�[39m

Name		Name	Last commit message	Last commit date
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.bidsignore		.bidsignore
.gitattributes		.gitattributes
CHANGES		CHANGES
README.md		README.md
_README		_README
dataset_description.json		dataset_description.json
participants.json		participants.json
participants.tsv		participants.tsv
scans.json		scans.json
task-cond_bold.json		task-cond_bold.json
task-rest_bold.json		task-rest_bold.json
task-test_bold.json		task-test_bold.json

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