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Merge pull request #24 from rynge/rynge-data-2024
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Moved to 2024 URLs for data guide
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xamberl authored Aug 1, 2024
2 parents 284b47d + b621dac commit 0f63781
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4 changes: 2 additions & 2 deletions docs/materials/data/part1-ex3-blast-split.md
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Expand Up @@ -30,7 +30,7 @@ you now need to blast a much larger dataset for your research.
This dataset can be downloaded with the following command:

``` console
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2023/mouse_rna.tar.gz
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2024/mouse_rna.tar.gz
```

After un-tar'ing (`tar xzf mouse_rna.tar.gz`) the file, you should be able to confirm that it's size is roughly 100 MB.
Expand All @@ -50,7 +50,7 @@ One of these is called [genome tools](http://genometools.org/), and you can down
(just like BLAST) using the following command:

``` console
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2023/gt-1.5.10-Linux_x86_64-64bit-complete.tar.gz
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2024/gt-1.5.10-Linux_x86_64-64bit-complete.tar.gz
```

Un-tar the gt package (`tar -xzvf ...`), then run its sequence file splitter as follows, with the target file size of 1MB:
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8 changes: 4 additions & 4 deletions docs/materials/data/part2-ex2-osdf-outputs.md
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Expand Up @@ -25,9 +25,9 @@ To get the exercise set up:

:::console
user@ap40 $ cd /ospool/ap40/data/[USERNAME]/
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2023/ducks.mov
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2023/teaching.mov
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2023/test_open_terminal.mov
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2024/ducks.mov
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2024/teaching.mov
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2024/test_open_terminal.mov

1. We're going to need a list of these files later. Below is the final list of movie files.
`cd` back to your `osdf-outputs` directory and create a file named `movie_list.txt`,
Expand Down Expand Up @@ -60,7 +60,7 @@ To get the `ffmpeg` binary do the following:
1. We'll be downloading the `ffmpeg` pre-built static binary originally from this page: <http://johnvansickle.com/ffmpeg/>.

:::console
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2023/ffmpeg-release-64bit-static.tar.xz
user@ap40 $ wget http://proxy.chtc.wisc.edu/SQUID/osg-school-2024/ffmpeg-release-64bit-static.tar.xz

1. Once the binary is downloaded, un-tar it, and then copy the main `ffmpeg` program into your current directory:

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