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Minor refactoring (#68) #97

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Minor refactoring (#68)

Minor refactoring (#68) #97

Triggered via push June 6, 2024 09:45
@rcannoodrcannood
pushed 33a2752
main
Status Failure
Total duration 2m 50s
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build.yml

on: push
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26s
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Matrix: build
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28 errors
build (process_dataset/filter_obs, /home/runner/work/task_perturbation_prediction/task_perturbati...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/run_limma, /home/runner/work/task_perturbation_prediction/task_perturbatio...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (control_methods/ground_truth, /home/runner/work/task_perturbation_prediction/task_perturba...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/filter_vars, /home/runner/work/task_perturbation_prediction/task_perturbat...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (metrics/mean_rowwise_error, /home/runner/work/task_perturbation_prediction/task_perturbati...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/lgc_ensemble_train, /home/runner/work/task_perturbation_prediction/task_perturbati...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/compute_pseudobulk, /home/runner/work/task_perturbation_prediction/task_pe...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (control_methods/mean_across_celltypes, /home/runner/work/task_perturbation_prediction/task...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (metrics/mean_rowwise_correlation, /home/runner/work/task_perturbation_prediction/task_pert...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (common/sync_test_resources, /home/runner/work/task_perturbation_prediction/task_perturbati...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (control_methods/zeros, /home/runner/work/task_perturbation_prediction/task_perturbation_pr...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/lgc_ensemble_direct, /home/runner/work/task_perturbation_prediction/task_perturbat...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/convert_kaggle_h5ad_to_parquet, /home/runner/work/task_perturbation_predic...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (control_methods/mean_outcome, /home/runner/work/task_perturbation_prediction/task_perturba...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/jn_ap_op2, /home/runner/work/task_perturbation_prediction/task_perturbation_predic...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (common/create_component, /home/runner/work/task_perturbation_prediction/task_perturbation_...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/bootstrap, /home/runner/work/task_perturbation_prediction/task_perturbatio...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (control_methods/sample, /home/runner/work/task_perturbation_prediction/task_perturbation_p...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/convert_h5ad_to_parquet, /home/runner/work/task_perturbation_prediction/ta...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/nn_retraining_with_pseudolabels, /home/runner/work/task_perturbation_prediction/ta...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/transformer_ensemble, /home/runner/work/task_perturbation_prediction/task_perturba...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/add_uns_metadata, /home/runner/work/task_perturbation_prediction/task_pert...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (control_methods/mean_across_compounds, /home/runner/work/task_perturbation_prediction/task...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/lgc_ensemble_prepare, /home/runner/work/task_perturbation_prediction/task_perturba...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/lgc_ensemble_predict, /home/runner/work/task_perturbation_prediction/task_perturba...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (process_dataset/generate_id_map, /home/runner/work/task_perturbation_prediction/task_pertu...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/pyboost, /home/runner/work/task_perturbation_prediction/task_perturbation_predicti...
The process '/home/runner/.local/bin/viash' failed with exit code 1
build (methods/scape, /home/runner/work/task_perturbation_prediction/task_perturbation_prediction...
The process '/home/runner/.local/bin/viash' failed with exit code 1