Code

Create Branch review table#6648

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matentzn wants to merge 55 commits intomastermonarch-initiative/mondo:masterfrom branch-review-tablemonarch-initiative/mondo:branch-review-tableCopy head branch name to clipboard

+3,185

Commits

Commits on Sep 15, 2023

• Add branch-review table

  matentzn

  committed
  ff582a7

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• Create quick-check.sparqlbook

  matentzn

  committed
  7a79d14

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• Create curate-branch-review.sparql

  matentzn

  committed
  c357625

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• update branch review ytables

  matentzn

  committed
  73784e6

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• Update curate-branch-review.sparql

  matentzn

  committed
  19b5e1f

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• Merge branch 'branch-review-table' of https://github.com/monarch-initiative/mondo into branch-review-table

  matentzn

  committed
  99c538d

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• update file

  matentzn

  committed
  bcade23

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Commits on Sep 22, 2023

• First stab at generating table using oaklib

  hrshdhgd

  committed
  6c33aab

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• code update

  hrshdhgd

  committed
  fa035c7

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• update makefile

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  8ed1b8d

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Commits on Sep 25, 2023

• Merge branch 'master' into branch-review-table

  hrshdhgd

  authored
  5fe0d1b

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• update code for clearer outputs

  hrshdhgd

  committed
  03ea0a3

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• formatted

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  6d7f813

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• Merge branch 'branch-review-table' of https://github.com/monarch-initiative/mondo into branch-review-table

  hrshdhgd

  committed
  d0122ce

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Commits on Sep 26, 2023

• updated code

  hrshdhgd

  committed
  d23452e

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• updated code

  hrshdhgd

  committed
  b371add

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• other columns should not have obsoletion_candidates

  hrshdhgd

  committed
  6d9903a

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• other columns should not have obsoletion_candidates

  hrshdhgd

  committed
  17ee229

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• minor cleanup

  hrshdhgd

  committed
  cca2c62

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• formatted and corrected code

  hrshdhgd

  committed
  8b3f8a6

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• upadted code based on NIco's suggestions

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  de41959

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Commits on Sep 27, 2023

• Added some comments

  hrshdhgd

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  9b4ecba

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Commits on Sep 30, 2023

• updated code

  hrshdhgd

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  8f67763

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Commits on Oct 3, 2023

• modified code as per requirements and understanding

  hrshdhgd

  committed
  c5e64cb

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• commented debug

  hrshdhgd

  committed
  7480ed2

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• Merge branch 'master' into branch-review-table

  hrshdhgd

  committed
  1e365f3

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• collect obsoletes too

  hrshdhgd

  committed
  98347e6

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• recipe for generating mondo.db via semsql

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  committed
  8188941

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• Merge branch 'master' into branch-review-table

  hrshdhgd

  committed
  561f02f

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• uncommented some code

  hrshdhgd

  committed
  5a889d1

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• refactored ad added inferred relationshions using method for ancestors

  hrshdhgd

  committed
  6053868

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Commits on Oct 4, 2023

• deleted as per Nico's request

  hrshdhgd

  committed
  7f1f6b2

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• tweaked logic

  hrshdhgd

  committed
  795acb5

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• formatted

  hrshdhgd

  committed
  67781dc

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Commits on Oct 5, 2023

• removing items from parents code commented

  hrshdhgd

  committed
  f71ed4d

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• Use an unreduced version of mondo

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  matentzn

  committed
  cd00173

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• comment updated

  hrshdhgd

  committed
  97a4c5e

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Commits on Oct 6, 2023

• Merge branch 'master' into branch-review-table

  matentzn

  committed
  2811cc4

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• make multiple obsoletion tables

  Show description for b4b854a
  matentzn

  committed
  b4b854a

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• relax+reason separately

  hrshdhgd

  committed
  d4834e0

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Commits on Oct 7, 2023

• Added extra rule

  hrshdhgd

  committed
  ef76d6d

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• Added comment

  hrshdhgd

  committed
  a429630

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• bug fixes affected status

  hrshdhgd

  committed
  5995dce

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Commits on Oct 8, 2023

• obsoletion needed to relax and reason

  hrshdhgd

  committed
  9e338c0

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• formatted

  hrshdhgd

  committed
  51e33d7

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• fixed the CURIE appearing in both in & out of branch

  hrshdhgd

  committed
  755b4eb

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Commits on Oct 9, 2023

• remove 1 id as per Sabrina's request

  hrshdhgd

  committed
  d3f9062

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• make file has for loop for split results

  hrshdhgd

  committed
  2d543af

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• indentation fixed

  hrshdhgd

  committed
  e421f49

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Commits on Oct 12, 2023

• #6762 rules addressed

  hrshdhgd

  committed
  684cac5

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Commits on Oct 13, 2023

• Fixes #6762

  hrshdhgd

  committed
  cc5586e

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Commits on Oct 16, 2023

• Added sparql query

  hrshdhgd

  committed
  ca3c7a9

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• Merge branch 'master' into branch-review-table

  matentzn

  committed
  addfa02

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Commits on Nov 16, 2023

• Merge branch 'master' into branch-review-table

  hrshdhgd

  committed
  31bdf13

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• added _2 to report filenames for a separate run

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  committed
  dfed161

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