Merge pull request #664 from monarch-initiative/medical_history

Medical history close #604 close #603
monarch-initiative · Jul 24, 2024 · c23eb70 · c23eb70
2 parents 44100f0 + 625e54d
commit c23eb70
Showing 1 changed file with 42 additions and 4 deletions.
diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl
@@ -977,6 +977,10 @@ Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001590>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001591>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001592>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001593>))
+Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001594>))
+Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001596>))
+Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001597>))
+Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0001598>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0009003>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0009004>))
 Declaration(Class(<http://purl.obolibrary.org/obo/MAXO_0009005>))
@@ -11327,8 +11331,8 @@ SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001591> <http://purl.obolibrary
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:29243000") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001592> "Specific RNA molecules are used to induce sequence-specific inhibition of target gene expression or translation for the purpose of therapy.")
 AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001592> <https://orcid.org/0000-0001-7941-2961>)
 AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001592> "2024-07-24T18:30:09Z"^^xsd:dateTime)
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001592> "RNAi therapy")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001592> "RNA interference-based therapy")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001592> "RNAi therapy")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001592> "RNA interference therapy")
 SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001592> <http://purl.obolibrary.org/obo/MAXO_0001001>)
 
@@ -11341,6 +11345,40 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynony
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001593> "antisense oligonucleotide inhibitor therapy")
 SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001593> <http://purl.obolibrary.org/obo/MAXO_0001001>)
 
+# Class: <http://purl.obolibrary.org/obo/MAXO_0001594> (family medical history assessment)
+
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001594> "Obtaining information about the health of directly related individuals.")
+AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001594> <https://orcid.org/0000-0001-7941-2961>)
+AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001594> "2024-07-24T19:59:36Z"^^xsd:dateTime)
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001594> "family medical history assessment")
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001594> <http://purl.obolibrary.org/obo/MAXO_0000574>)
+
+# Class: <http://purl.obolibrary.org/obo/MAXO_0001596> (patient reproductive history assessment)
+
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001596> "Obtaining information about a patient's reproductive experiences.")
+AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001596> <https://orcid.org/0000-0001-7941-2961>)
+AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001596> "2024-07-24T20:05:44Z"^^xsd:dateTime)
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001596> "patient reproductive history assessment")
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001596> <http://purl.obolibrary.org/obo/MAXO_0000574>)
+
+# Class: <http://purl.obolibrary.org/obo/MAXO_0001597> (age at menarch assessment)
+
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001597> "Obtaining information about the onset of menarch, the beginning of the first menstrual cycle.")
+AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001597> <https://orcid.org/0000-0001-7941-2961>)
+AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001597> "2024-07-24T20:06:53Z"^^xsd:dateTime)
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001597> "determination of start of menstruation")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0001597> "determination of start of period")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001597> "age at menarch assessment")
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001597> <http://purl.obolibrary.org/obo/MAXO_0001596>)
+
+# Class: <http://purl.obolibrary.org/obo/MAXO_0001598> (age at menopause assessment)
+
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0001598> "Obtaining information about the age of menopause of a patient.")
+AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/MAXO_0001598> <https://orcid.org/0000-0001-7941-2961>)
+AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0001598> "2024-07-24T20:09:37Z"^^xsd:dateTime)
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0001598> "age at menopause assessment")
+SubClassOf(<http://purl.obolibrary.org/obo/MAXO_0001598> <http://purl.obolibrary.org/obo/MAXO_0001596>)
+
 # Class: <http://purl.obolibrary.org/obo/MAXO_0009003> (preimplantation genetic testing)
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "NCBIBook:NBK5191") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MAXO_0009003> "Genetic testing of one or more cells removed from early embryos conceived by in vitro fertilization and transferring to the mother's uterus only those embryos determined not to have the pathogenic variant(s)/chromosome anomaly(ies) of concern.")
@@ -11452,10 +11490,10 @@ AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#has
 AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0009012> "2022-03-28T19:32:20Z"^^xsd:dateTime)
 AnnotationAssertion(dcterms:creator <http://purl.obolibrary.org/obo/MAXO_0009012> <http://orcid.org/0000-0001-7941-2961>)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "Foetal transfusion")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "fetal transfusion")
-AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "intrauterine transfusion")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "IUT")
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasSynonymType> <http://purl.obolibrary.org/obo/maxo#ABBREVIATION>) <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "IUT")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "fetal transfusion")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "intrauterine transfusion")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "percutaneous fetal transfusion")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MAXO_0009012> "percutaneous foetal transfusion")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MAXO_0009012> "intrauterine fetal transfusion"@en)
@@ -12754,5 +12792,5 @@ AnnotationAssertion(dcterms:creator <http://purl.obolibrary.org/obo/MAXO_0035122
 AnnotationAssertion(dce:date <http://purl.obolibrary.org/obo/MAXO_0035123> "2023-04-11T12:00:00Z")
 AnnotationAssertion(dcterms:contributor <http://purl.obolibrary.org/obo/MAXO_0035123> <https://orcid.org/0000-0002-0736-9199>)
 AnnotationAssertion(dcterms:creator <http://purl.obolibrary.org/obo/MAXO_0035123> <https://orcid.org/0000-0001-7941-2961>)
-AnnotationAssertion(<http://purl.obolibrary.org/obo/maxo#ABBREVIATION> _:genid2147483653 "")
+AnnotationAssertion(<http://purl.obolibrary.org/obo/maxo#ABBREVIATION> _:genid2147483648 "")
 )