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@exascale-genomics

Exascale Genomics Analysis toolkit

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  1. SAIGE-GPU SAIGE-GPU Public

    A GPU version of SAIGE for full GRM GWAS analysis

    R 14 1

  2. mvp-wgs-sv mvp-wgs-sv Public

    Python 1

  3. covid19-datasets covid19-datasets Public

    Forked from sfu-db/covid19-datasets

    A list of high quality open datasets for COVID-19 data analysis

    HTML

  4. SAIGE-Pre SAIGE-Pre Public

    Forked from weizhouUMICH/SAIGE

    R

  5. pheweb pheweb Public

    Forked from statgen/pheweb

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python

  6. regenie regenie Public

    Forked from rgcgithub/regenie

    regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.

    C++

Repositories

Showing 10 of 13 repositories
  • SAIGE-GPU Public

    A GPU version of SAIGE for full GRM GWAS analysis

    exascale-genomics/SAIGE-GPU’s past year of commit activity
    R 14 1 5 0 Updated Nov 15, 2024
  • mvp-wgs-sv Public
    exascale-genomics/mvp-wgs-sv’s past year of commit activity
    Python 1 0 0 0 Updated Nov 15, 2024
  • exascale-genomics.github.io Public

    Exascale Genomics tools for genome-wide population analysis

    exascale-genomics/exascale-genomics.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 13, 2023
  • SAIGE-DOE Public Forked from saigegit/SAIGE

    Development for SAIGE and SAIGE-GENE(+)

    exascale-genomics/SAIGE-DOE’s past year of commit activity
    C++ 0 GPL-3.0 27 0 0 Updated Oct 6, 2023
  • scRNASeq Public

    Scripts for carrying out single cell RNA-seq analysis

    exascale-genomics/scRNASeq’s past year of commit activity
    Python 0 0 0 0 Updated Oct 1, 2023
  • PRS-dev Public Forked from markxiao/PRS-dev
    exascale-genomics/PRS-dev’s past year of commit activity
    Nextflow 0 1 0 0 Updated Aug 8, 2022
  • GenomeWorks Public Forked from NVIDIA-Genomics-Research/GenomeWorks

    SDK for GPU accelerated genome assembly and analysis

    exascale-genomics/GenomeWorks’s past year of commit activity
    Cuda 0 Apache-2.0 76 0 0 Updated Jun 22, 2022
  • AMP_AD_StructuralVariation Public Forked from RajLabMSSM/AMP_AD_StructuralVariation

    Repository for the AMP-AD structural variation manuscript

    exascale-genomics/AMP_AD_StructuralVariation’s past year of commit activity
    HTML 0 MIT 6 0 0 Updated Mar 14, 2022
  • pnet_prostate_paper Public Forked from marakeby/pnet_prostate_paper

    P-NET, Biologically informed deep neural network for prostate cancer classification and discovery

    exascale-genomics/pnet_prostate_paper’s past year of commit activity
    HTML 0 GPL-2.0 60 0 0 Updated Sep 22, 2021
  • SAIGE-Pre Public Forked from weizhouUMICH/SAIGE
    exascale-genomics/SAIGE-Pre’s past year of commit activity
    R 0 LGPL-3.0 74 0 0 Updated Mar 15, 2021
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