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tum-pbs · Jan 4, 2025 · 6efec38 · 6efec38
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diff --git a/Billiards.html b/Billiards.html
@@ -15300,7 +15300,7 @@ <h1 id="Billiards-in-%CE%A6Flow">Billiards in &#934;<sub>Flow</sub><a class="anc
 
 
 <div class="jp-RenderedText jp-OutputArea-output" data-mime-type="application/vnd.jupyter.stderr">
-<pre>/tmp/ipykernel_1934/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
+<pre>/tmp/ipykernel_1935/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
   dist_norm = math.vec_length(dist, eps=1e-4)  # eps to avoid NaN during backprop of sqrt
 </pre>
 </div>
@@ -15580,7 +15580,7 @@ <h1 id="Billiards-in-%CE%A6Flow">Billiards in &#934;<sub>Flow</sub><a class="anc
 
 
 <div class="jp-RenderedText jp-OutputArea-output" data-mime-type="application/vnd.jupyter.stderr">
-<pre>/tmp/ipykernel_1934/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
+<pre>/tmp/ipykernel_1935/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
   dist_norm = math.vec_length(dist, eps=1e-4)  # eps to avoid NaN during backprop of sqrt
 </pre>
 </div>
@@ -16556,7 +16556,7 @@ <h1 id="Billiards-in-%CE%A6Flow">Billiards in &#934;<sub>Flow</sub><a class="anc
 
 
 <div class="jp-RenderedText jp-OutputArea-output" data-mime-type="application/vnd.jupyter.stderr">
-<pre>/tmp/ipykernel_1934/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
+<pre>/tmp/ipykernel_1935/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
   dist_norm = math.vec_length(dist, eps=1e-4)  # eps to avoid NaN during backprop of sqrt
 </pre>
 </div>
@@ -16651,7 +16651,7 @@ <h1 id="Billiards-in-%CE%A6Flow">Billiards in &#934;<sub>Flow</sub><a class="anc
 <div class="jp-RenderedText jp-OutputArea-output" data-mime-type="application/vnd.jupyter.stderr">
 <pre>/opt/hostedtoolcache/Python/3.12.8/x64/lib/python3.12/site-packages/phiml/math/_functional.py:628: RuntimeWarning: Using torch for gradient computation because numpy does not support jacobian()
   warnings.warn(f&#34;Using {math.default_backend()} for gradient computation because {key.backend} does not support jacobian()&#34;, RuntimeWarning)
-/tmp/ipykernel_1934/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
+/tmp/ipykernel_1935/1958517515.py:4: DeprecationWarning: phiml.math.length is deprecated in favor of phiml.math.norm
   dist_norm = math.vec_length(dist, eps=1e-4)  # eps to avoid NaN during backprop of sqrt
 </pre>
 </div>

diff --git a/Cookbook.html b/Cookbook.html
diff --git a/Fluid_Simulation.html b/Fluid_Simulation.html
diff --git a/Heightmaps.html b/Heightmaps.html
diff --git a/IO_with_Scenes.html b/IO_with_Scenes.html
diff --git a/Math_Introduction.html b/Math_Introduction.html
diff --git a/Unstructured.html b/Unstructured.html
@@ -15210,17 +15210,17 @@ <h2 id="Loading-an-Unstructured-Mesh">Loading an Unstructured Mesh<a class="anch
 <span class="ansi-green-intense-fg ansi-bold">   1357</span>     results<span style="color: rgb(98,98,98)">.</span>append(f_output)
 <span class="ansi-green-intense-fg ansi-bold">   1358</span> <span class="ansi-bold" style="color: rgb(0,135,0)">if</span> <span style="color: rgb(0,135,0)">isinstance</span>(results[<span style="color: rgb(98,98,98)">0</span>], <span style="color: rgb(0,135,0)">tuple</span>):
 
-File <span class="ansi-green-fg">/opt/hostedtoolcache/Python/3.12.8/x64/lib/python3.12/site-packages/phi/geom/_mesh.py:489</span>, in <span class="ansi-cyan-fg">load_su2</span><span class="ansi-blue-fg">(file_or_mesh, cell_dim, face_format)</span>
-<span class="ansi-green-intense-fg ansi-bold">    475</span> <span style="color: rgb(175,0,0)">&#34;&#34;&#34;</span>
-<span class="ansi-green-intense-fg ansi-bold">    476</span> <span style="color: rgb(175,0,0)">Load an unstructured mesh from a `.su2` file.</span>
-<span class="ansi-green-intense-fg ansi-bold">    477</span> 
+File <span class="ansi-green-fg">/opt/hostedtoolcache/Python/3.12.8/x64/lib/python3.12/site-packages/phi/geom/_mesh.py:494</span>, in <span class="ansi-cyan-fg">load_su2</span><span class="ansi-blue-fg">(file_or_mesh, cell_dim, face_format)</span>
+<span class="ansi-green-intense-fg ansi-bold">    480</span> <span style="color: rgb(175,0,0)">&#34;&#34;&#34;</span>
+<span class="ansi-green-intense-fg ansi-bold">    481</span> <span style="color: rgb(175,0,0)">Load an unstructured mesh from a `.su2` file.</span>
+<span class="ansi-green-intense-fg ansi-bold">    482</span> 
 <span class="ansi-green-fg">   (...)</span>
-<span class="ansi-green-intense-fg ansi-bold">    486</span> <span style="color: rgb(175,0,0)">    `Mesh`</span>
-<span class="ansi-green-intense-fg ansi-bold">    487</span> <span style="color: rgb(175,0,0)">&#34;&#34;&#34;</span>
-<span class="ansi-green-intense-fg ansi-bold">    488</span> <span class="ansi-bold" style="color: rgb(0,135,0)">if</span> <span style="color: rgb(0,135,0)">isinstance</span>(file_or_mesh, <span style="color: rgb(0,135,0)">str</span>):
-<span class="ansi-green-fg">--&gt; 489</span>     <span class="ansi-bold" style="color: rgb(0,135,0)">from</span> <span class="ansi-bold" style="color: rgb(0,0,255)">ezmesh</span> <span class="ansi-bold" style="color: rgb(0,135,0)">import</span> import_from_file
-<span class="ansi-green-intense-fg ansi-bold">    490</span>     mesh <span style="color: rgb(98,98,98)">=</span> import_from_file(file_or_mesh)
-<span class="ansi-green-intense-fg ansi-bold">    491</span> <span class="ansi-bold" style="color: rgb(0,135,0)">else</span>:
+<span class="ansi-green-intense-fg ansi-bold">    491</span> <span style="color: rgb(175,0,0)">    `Mesh`</span>
+<span class="ansi-green-intense-fg ansi-bold">    492</span> <span style="color: rgb(175,0,0)">&#34;&#34;&#34;</span>
+<span class="ansi-green-intense-fg ansi-bold">    493</span> <span class="ansi-bold" style="color: rgb(0,135,0)">if</span> <span style="color: rgb(0,135,0)">isinstance</span>(file_or_mesh, <span style="color: rgb(0,135,0)">str</span>):
+<span class="ansi-green-fg">--&gt; 494</span>     <span class="ansi-bold" style="color: rgb(0,135,0)">from</span> <span class="ansi-bold" style="color: rgb(0,0,255)">ezmesh</span> <span class="ansi-bold" style="color: rgb(0,135,0)">import</span> import_from_file
+<span class="ansi-green-intense-fg ansi-bold">    495</span>     mesh <span style="color: rgb(98,98,98)">=</span> import_from_file(file_or_mesh)
+<span class="ansi-green-intense-fg ansi-bold">    496</span> <span class="ansi-bold" style="color: rgb(0,135,0)">else</span>:
 
 <span class="ansi-red-fg">ModuleNotFoundError</span>: No module named &#39;ezmesh&#39;</pre>
 </div>

diff --git a/data/sim_000000/batched_noise_data_000000.npz b/data/sim_000000/batched_noise_data_000000.npz
diff --git a/data/sim_000000/description.json b/data/sim_000000/description.json
@@ -10,10 +10,10 @@
       null
     ],
     "data": [
-      0.06428778916597366,
-      0.6195746660232544,
-      0.07410836964845657,
-      0.9235832691192627
+      0.4464888870716095,
+      0.8391245603561401,
+      0.6090283393859863,
+      0.1093357652425766
     ]
   },
   "__tensors__": [

diff --git a/data/sim_000000/noise_data_000000.npz b/data/sim_000000/noise_data_000000.npz
diff --git a/data/sim_000001/batched_noise_data_000000.npz b/data/sim_000001/batched_noise_data_000000.npz
diff --git a/data/sim_000001/description.json b/data/sim_000001/description.json
@@ -1,3 +1,3 @@
 {
-  "smoothness": 0.06428778916597366
+  "smoothness": 0.4464888870716095
 }
diff --git a/data/sim_000002/batched_noise_data_000000.npz b/data/sim_000002/batched_noise_data_000000.npz
diff --git a/data/sim_000002/description.json b/data/sim_000002/description.json
@@ -1,3 +1,3 @@
 {
-  "smoothness": 0.6195746660232544
+  "smoothness": 0.8391245603561401
 }
diff --git a/data/sim_000003/batched_noise_data_000000.npz b/data/sim_000003/batched_noise_data_000000.npz
diff --git a/data/sim_000003/description.json b/data/sim_000003/description.json
@@ -1,3 +1,3 @@
 {
-  "smoothness": 0.07410836964845657
+  "smoothness": 0.6090283393859863
 }
diff --git a/data/sim_000004/batched_noise_data_000000.npz b/data/sim_000004/batched_noise_data_000000.npz
diff --git a/data/sim_000004/description.json b/data/sim_000004/description.json
@@ -1,3 +1,3 @@
 {
-  "smoothness": 0.9235832691192627
+  "smoothness": 0.1093357652425766
 }
diff --git a/phi/field/index.html b/phi/field/index.html
@@ -833,7 +833,7 @@ <h2 id="args">Args</h2>
 </dl></div>
 </dd>
 <dt id="phi.field.divergence"><code class="name flex">
-<span>def <span class="ident">divergence</span></span>(<span>field: phi.field._field.Field,<br>order=2,<br>implicit: phiml.math._optimize.Solve = None,<br>upwind: phi.field._field.Field = None,<br>implicitness: int = None) ‑> <function <a title="phi.field.CenteredGrid" href="#phi.field.CenteredGrid">CenteredGrid()</a> at 0x7f54fc1f82c0></span>
+<span>def <span class="ident">divergence</span></span>(<span>field: phi.field._field.Field,<br>order=2,<br>implicit: phiml.math._optimize.Solve = None,<br>upwind: phi.field._field.Field = None,<br>implicitness: int = None) ‑> <function <a title="phi.field.CenteredGrid" href="#phi.field.CenteredGrid">CenteredGrid()</a> at 0x7fb9c1408360></span>
 </code></dt>
 <dd>
 <details class="source">

diff --git a/phi/geom/index.html b/phi/geom/index.html
@@ -7774,6 +7774,9 @@ <h2 id="args">Args</h2>
             &#39;boundary_slices&#39;: boundary_slices,
         }
 
+    def _build_faces(self):
+        return build_faces(self.vertices.center, self.elements, self.boundaries, self.element_rank, self.periodic, self._vertex_mean, self.face_format)
+
     @property
     def face_shape(self) -&gt; Shape:
         return instance(self.elements) &amp; dual
@@ -7816,6 +7819,8 @@ <h2 id="args">Args</h2>
         return {self.face_shape.dual.name: slice(0, instance(self).volume)}
 
     def pad_boundary(self, value: Tensor, widths: Dict[str, Dict[str, slice]] = None, mode: Extrapolation or Tensor or Number = 0, **kwargs) -&gt; Tensor:
+        if not widths:
+            return value
         mode = as_extrapolation(mode)
         if self.face_shape.dual.name not in value.shape:
             value = rename_dims(value, instance, self.face_shape.dual)
@@ -8980,6 +8985,8 @@ <h2 id="returns">Returns</h2>
 <span>Expand source code</span>
 </summary>
 <pre><code class="python">def pad_boundary(self, value: Tensor, widths: Dict[str, Dict[str, slice]] = None, mode: Extrapolation or Tensor or Number = 0, **kwargs) -&gt; Tensor:
+    if not widths:
+        return value
     mode = as_extrapolation(mode)
     if self.face_shape.dual.name not in value.shape:
         value = rename_dims(value, instance, self.face_shape.dual)

diff --git a/phi/physics/fluid.html b/phi/physics/fluid.html
@@ -97,7 +97,7 @@ <h2 id="returns">Returns</h2>
 <p>Velocity of same type as <code>velocity</code></p></div>
 </dd>
 <dt id="phi.physics.fluid.boundary_push"><code class="name flex">
-<span>def <span class="ident">boundary_push</span></span>(<span>particles: <function PointCloud at 0x7f54fc1f9440>,<br>obstacles: tuple,<br>separation: float = 0.5) ‑> <function PointCloud at 0x7f54fc1f9440></span>
+<span>def <span class="ident">boundary_push</span></span>(<span>particles: <function PointCloud at 0x7fb9c14094e0>,<br>obstacles: tuple,<br>separation: float = 0.5) ‑> <function PointCloud at 0x7fb9c14094e0></span>
 </code></dt>
 <dd>
 <details class="source">
@@ -222,7 +222,7 @@ <h2 id="returns">Returns</h2>
 </dl></div>
 </dd>
 <dt id="phi.physics.fluid.make_incompressible"><code class="name flex">
-<span>def <span class="ident">make_incompressible</span></span>(<span>velocity: phi.field._field.Field,<br>obstacles: <a title="phi.physics.fluid.Obstacle" href="#phi.physics.fluid.Obstacle">Obstacle</a> = (),<br>solve: phiml.math._optimize.Solve = auto with tolerance None (rel), None (abs), max_iterations=1000,<br>active: <function CenteredGrid at 0x7f54fc1f82c0> = None,<br>order: int = 2,<br>correct_skew=False,<br>wide_stencil: bool = None) ‑> Tuple[phi.field._field.Field, phi.field._field.Field]</span>
+<span>def <span class="ident">make_incompressible</span></span>(<span>velocity: phi.field._field.Field,<br>obstacles: <a title="phi.physics.fluid.Obstacle" href="#phi.physics.fluid.Obstacle">Obstacle</a> = (),<br>solve: phiml.math._optimize.Solve = auto with tolerance None (rel), None (abs), max_iterations=1000,<br>active: <function CenteredGrid at 0x7fb9c1408360> = None,<br>order: int = 2,<br>correct_skew=False,<br>wide_stencil: bool = None) ‑> Tuple[phi.field._field.Field, phi.field._field.Field]</span>
 </code></dt>
 <dd>
 <details class="source">