Run black (PennLINC#389)

aslprep/__main__.py

@@ -1,4 +1,5 @@
 """A way to run the ASLPrep CLI with a Python call."""
+
 from aslprep.cli.run import main
 
 if __name__ == "__main__":

aslprep/_warnings.py

@@ -1,4 +1,5 @@
 """Manipulate Python warnings."""
+
 import logging
 import warnings
 

aslprep/data/__init__.py

@@ -10,6 +10,7 @@
 
 .. autoclass:: Loader
 """
+
 from __future__ import annotations
 
 import atexit

aslprep/interfaces/ants.py

@@ -1,4 +1,5 @@
 """ANTS interfaces."""
+
 from nipype.interfaces.base import traits
 from nipype.utils.filemanip import fname_presuffix
 from niworkflows.interfaces.fixes import (

aslprep/interfaces/bids.py

@@ -1,4 +1,5 @@
 """Adapted interfaces from Niworkflows."""
+
 from json import loads
 
 from bids.layout import Config

aslprep/interfaces/cbf.py

@@ -1,4 +1,5 @@
 """Interfaces for calculating CBF."""
+
 import os
 from numbers import Number
 

aslprep/interfaces/plotting.py

@@ -1,4 +1,5 @@
 """Plotting interfaces."""
+
 import nibabel as nb
 import numpy as np
 import pandas as pd

aslprep/interfaces/reference.py

@@ -1,4 +1,5 @@
 """Interfaces for building reference images."""
+
 import nibabel as nb
 import pandas as pd
 from nipype.interfaces.base import (

aslprep/interfaces/utility.py

@@ -1,4 +1,5 @@
 """Utility interfaces for ASLPrep."""
+
 import os
 
 import nibabel as nb

aslprep/tests/conftest.py

@@ -1,4 +1,5 @@
 """Fixtures for the CircleCI tests."""
+
 import base64
 import os
 

aslprep/tests/test_cli.py

@@ -1,4 +1,5 @@
 """Command-line interface tests."""
+
 import os
 
 import pytest

aslprep/tests/test_interfaces_cbf.py

@@ -1,4 +1,5 @@
 """Tests for the aslprep.interfaces.cbf submodule."""
+
 import os
 
 import nibabel as nb

aslprep/tests/test_parser.py

@@ -1,4 +1,5 @@
 """Test parser."""
+
 import pytest
 from packaging.version import Version
 

aslprep/tests/test_utils_cbf.py

@@ -1,4 +1,5 @@
 """Tests for the aslprep.utils.cbf module."""
+
 import numpy as np
 
 from aslprep.utils import cbf

aslprep/tests/test_version.py

@@ -1,4 +1,5 @@
 """Test version checks."""
+
 from datetime import datetime
 from pathlib import Path
 

aslprep/tests/utils.py

@@ -1,4 +1,5 @@
 """Utility functions for tests."""
+
 import os
 import tarfile
 from contextlib import contextmanager

aslprep/utils/__init__.py

@@ -1,4 +1,5 @@
 """Utility functions for aslprep."""
+
 from aslprep.utils import asl, atlas, bids, cbf, confounds, misc, plotting, sentry
 
 __all__ = [

aslprep/utils/asl.py

@@ -1,4 +1,5 @@
 """Functions for working with ASL data."""
+
 from __future__ import annotations
 
 from typing import Any

aslprep/utils/cbf.py

@@ -1,4 +1,5 @@
 """Functions for calculating CBF."""
+
 from __future__ import annotations
 
 import numpy as np

aslprep/utils/confounds.py

@@ -1,4 +1,5 @@
 """Functions for calculating and collecting confounds."""
+
 import os
 import re
 

aslprep/utils/plotting.py

@@ -1,4 +1,5 @@
 """Plotting functions and classes."""
+
 import matplotlib.pyplot as plt
 import nibabel as nb
 import numpy as np

aslprep/workflows/__init__.py

@@ -1,4 +1,5 @@
 """Nipype workflows for the ASLPrep BIDS App."""
+
 from aslprep.workflows import asl, base
 
 __all__ = [

aslprep/workflows/asl/apply.py

@@ -1,4 +1,5 @@
 """Workflows to apply changes to ASL data."""
+
 from __future__ import annotations
 
 import nipype.interfaces.utility as niu