SeqFu 1.16.0 — 🖍 crayon

• Update color schemes for fu-msa, added aminoacid
• Bugfix in seqfu check to ensure matching of the correct files when using --dir
• Bugfix in seqfu bases to ensure --abs and --basename are honored
• Update unit tests
• Code refactoring on several tools

SeqFu 1.15.3 – 🫧 Bath Hackathon edition

Experimental seqfu bases

SeqFu 1.15.0 — 🕵️‍♂️ Sherlock edition

• New SeqFu check program to validate the integrity of FASTQ datasets
• Bug fix in seqfu qual that was printing debug information in non-debug runs

SeqFu v1.14.0 — 🥒 slicing edition

• First release officially shipping fu-split
  • fu-split now can use a different SeqFu than specified in path, setting $SEQFU_BIN or --bin option
  • fu-split version check fixed
• SeqFu grep will die if fed with non existing files (to ensure no wrong parameters were passed)
• SeqFu grep will match oligos case insensitive by default
• Addedd invert match -v to seqfu grep
• Improved fu-tabcheck, notably added --inspect option to print columns info
• ⚠️ Bugfix in seqfu tab: was not working with FASTA files
• SeqFu head and SeqFu tail migrated to readfq library

SeqFu v1.13.2

• added --print-last option to seqfu cat and seqfu heda
• updated fu-split, with support for paired end reads, improved performance thanks to --print-last, new tests

SeqFu v1.13.1

• added fu-split (experimental)

SeqFu v1.13.0 — 💎🐈‍⬛ rich cat edition

• seqfu cat now can skip a set of initial sequences (--skip-first INT) or start from a specific sequence (--jump-to AFTERTHIS)
• Minor updates in the test suite, github actions (including rich_codex) and documentation updates

SeqFu v1.12.0 – 🇨🇦 Canadian edition

• Expanded "fu-index": also reports run infos, not only indexes
• Minor bugfix

SeqFu v1.11.0 – 👑 jubilee edition

• Improved seqfu stats: added sorting option and JSON output, added GC content, improved test suite.
• bugfix Seqfu tabulate -d (detabulate) was too stringent in requiring forward and reverse reads to have the same length 🤦

SeqFu v1.10.0 – 🤍 Bianca edition

• Added support for MetaPhage to seqfu metadata
• Added --header to fu-tabcheck
• Minor fixes