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telatin committed Oct 14, 2021
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33 changes: 33 additions & 0 deletions docs/releases/v1.8.1.md
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# SeqFu v1.8.1

### Changes
* introduced `fu-homocomp` to compress homopolymers

### Splash screen
```text
SeqFu - Sequence Fastx Utilities
version: 1.8.1
· count [cnt] : count FASTA/FASTQ reads, pair-end aware
· deinterleave [dei] : deinterleave FASTQ
· derep [der] : feature-rich dereplication of FASTA/FASTQ files
· interleave [ilv] : interleave FASTQ pair ends
· lanes [mrl] : merge Illumina lanes
· list [lst] : print sequences from a list of names
· metadata [met] : print a table of FASTQ reads (mapping files)
· sort [srt] : sort sequences by size (uniques)
· stats [st] : statistics on sequence lengths
· cat : concatenate FASTA/FASTQ files
· grep : select sequences with patterns
· head : print first sequences
· rc : reverse complement strings or files
· tab : tabulate reads to TSV (and viceversa)
· tail : view last sequences
· view : view sequences with colored quality and oligo matches
Add --help after each command to print usage
```


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