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Merging from dev_graph #9

Merged
merged 48 commits into from
Mar 5, 2024
Merged

Merging from dev_graph #9

merged 48 commits into from
Mar 5, 2024

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sreekarreddydfci
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VarunUllanat and others added 30 commits February 6, 2024 17:50
@VarunUllanat
Make pre-commit compliant
d716dc9
@VarunUllanat
Update tests-conda.yml
c5b8cb8
@VarunUllanat
Update tests-conda.yml
50df092
@VarunUllanat
revert back to old environment
45f1be6
@VarunUllanat
Merge branch 'dev_graph' of https://github.com/Dana-Farber-AIOS/pathml …
a6a2c5a 
…into dev_graph
@VarunUllanat
Update tests-conda.yml to remove Deepcell install
309d489
@VarunUllanat
Update tests-conda.yml to free space
7c299d1
@sreekarreddydfci
Merge pull request Dana-Farber-AIOS#417 from sreekarreddydfci/dev-til…
123a0e6 
…estitching

Added testcases and updated example notebooks
@sreekarreddydfci
Merge remote-tracking branch 'upstream/dev_graph' into dev-tilestitching
5ebc325
@VarunUllanat
Merge pull request Dana-Farber-AIOS#418 from Dana-Farber-AIOS/dev-til…
33f02e7 
…estitching

Added testcases and updated example notebooks
@VarunUllanat
Added new two-hop computation
ce0c253
@VarunUllanat
Merge branch 'dev_graph' of https://github.com/Dana-Farber-AIOS/pathml …
2650d5a 
…into dev_graph
@VarunUllanat
Added python version in environment file
1d36395
@VarunUllanat
Removed deepcell installation
20757a0
@VarunUllanat
Updated graph utils and clean
7a7e092
@sreekarreddydfci
Update test_inference.py
9350557
@sreekarreddydfci
Update test_inference.py
ac2e90f
@VarunUllanat
Updated stain normalization class
5a64b73
@VarunUllanat
Updated stain normalization class
9d5885b
@VarunUllanat
`Merge branch 'dev_graph' of https://github.com/Dana-Farber-AIOS/pathml…
c12ca8a 
… into dev_graph
@VarunUllanat
Updated graph utils tests
b1f37f4
@sreekarreddydfci
Updated example notebooks
0d1ad73
@sreekarreddydfci
Merge remote-tracking branch 'upstream/dev_graph' into dev-tilestitching
f213b02
@sreekarreddydfci
Updated graphs notebook
85ce24d
@VarunUllanat
Added documentation for graph API
044b9bb
@sreekarreddydfci
Merge pull request Dana-Farber-AIOS#419 from sreekarreddydfci/dev-til…
09fae9b 
…estitching

Updated example notebooks
@VarunUllanat
Merge pull request Dana-Farber-AIOS#420 from Dana-Farber-AIOS/dev-til…
9a40d2d 
…estitching

Updated example notebooks
@VarunUllanat
Updated environment file, added instructions and references
5a4a493
@VarunUllanat
Cleaned up examples and setup.py
90288b4
@sreekarreddydfci
Updated example notebook
71dbb29 
Added graph overlay on image
sreekarreddydfci
sreekarreddydfci commented Mar 5, 2024
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@sreekarreddydfci sreekarreddydfci merged commit 59966e5 into dev-crossplatformtests Mar 5, 2024
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3 participants
@sreekarreddydfci @VarunUllanat @jamesgwen