Dev tilestitching #1
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Tests Cross-Platform | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| branches: | |
| - dev | |
| - master | |
| push: | |
| branches: | |
| - dev | |
| - master | |
| jobs: | |
| build: | |
| name: Build (${{ matrix.os }}, Python ${{ matrix.python-version }}) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| python-version: [3.8, 3.9, 3.10] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-update-conda: true | |
| miniforge-version: latest | |
| use-mamba: true | |
| python-version: ${{ matrix.python-version }} | |
| activate-environment: pathml | |
| environment-file: environment.yml | |
| channels: conda-forge | |
| - name: Conda info | |
| shell: bash -l {0} | |
| run: conda info | |
| - name: Conda Version | |
| shell: bash -l {0} | |
| run: conda --version | |
| # - name: Install additional dependencies | |
| # if: matrix.os == 'ubuntu-latest' || matrix.os == 'ubuntu-18.04' | |
| # shell: bash -l {0} | |
| # run: | | |
| # sudo apt-get update | |
| # sudo apt-get install openslide-tools | |
| # sudo apt-get install pandoc | |
| # - name: Install additional dependencies | |
| # shell: bash -l {0} | |
| # run: | | |
| # mamba install spams torchvision==0.14.1 | |
| # - name: Test with coverage | |
| # shell: bash -l {0} | |
| # run: | | |
| # coverage run -m pytest | |
| # coverage xml -o coverage.xml | |
| # - name: Upload coverage to Codecov | |
| # uses: codecov/codecov-action@v2 | |
| # with: | |
| # token: ${{ secrets.CODECOV_TOKEN }} | |
| # files: ./coverage.xml | |
| # fail_ci_if_error: true |