Bug fixes for netcdf files, and more

pyproject.toml

@@ -20,12 +20,16 @@ dependencies = [
     "pathlib",
     "requests",
     "rasterio",
-    "netcdf4",
+    "netCDF4",
     "h5netcdf",
     "zarr",
     "dask",
     "awscli",
     "s3fs",
+    "pydap",
+    "cftime",
+    "cfgrib",
+    "pooch",
     "fsspec",
     "gdown",
     "aiohttp",

src/goes_ortho/Downloader.py

@@ -15,7 +15,11 @@ def ABI_Downloader(home, bucket, year, month, day, hour, product, channel):  # n
     product = can be a List or a single string for ABI sensors products from GOES satellite next-generation example: ["ABI-L2-CMIPF"] or "ABI-L1b-RadF"
     channel = Required only for "ABI-L1b-Rad" and "ABI-L2-CMIP" products. Can be a List or a single string for the channels from ABI sensors. Example = ['01','02'] or "13" (channel is ignored for other ABI products)
     """
-    from goes_ortho import boto3, botocore, checkData
+
+    import boto3
+    import botocore
+
+    from goes_ortho import checkData
     from goes_ortho.utils import ProgressPercentage, __isAList
 
     julianDay = ""
@@ -146,7 +150,10 @@ def GLM_Downloader(home, bucket, year, month, day, hour):
     day   = type List for day date: example = ['10','20','30']
     hour   = type List for hour need be UTC coordinate time date: example = ['06','12','18']"""
 
-    from goes_ortho import boto3, botocore, checkData
+    import boto3
+    import botocore
+
+    from goes_ortho import checkData
     from goes_ortho.utils import ProgressPercentage, __isAList
 
     julianDay = ""

src/goes_ortho/__init__.py

@@ -1,3 +1,15 @@
+from . import (
+    Downloader,
+    checkData,
+    clip,
+    geometry,
+    get_data,
+    io,
+    orthorectify,
+    rad,
+    timeseries,
+    utils,
+)
 from .version import version as __version__
 
 __all__ = [

src/goes_ortho/checkData.py

@@ -4,8 +4,7 @@ def createPathGoesData(home, bucket, year, month, day, product, hour, channel=No
     """Function used create a directory, with the calendar date the user give to function"""
 
     import errno
-
-    from goes_ortho import os
+    import os
 
     pathReturn = ""
     """that part will get your home directory and the Satellite bucket you're getting your dataset
@@ -62,7 +61,7 @@ def checkFiles(path, singleFile):
     The singleFile is the filename from the data in the bucket 'noaa-goes16'
          and will check the singleFile exists on the created path
     """
-    from goes_ortho import os
+    import os
 
     if os.path.isfile("{0}/{1}".format(path, singleFile)):
         return True
@@ -86,7 +85,7 @@ def checkSize(path, singleFile, singleSize):
 
     """
 
-    from goes_ortho import os
+    import os
 
     if checkFiles(path, singleFile):
         if os.path.getsize(path + singleFile) == singleSize:

src/goes_ortho/clip.py

@@ -39,7 +39,7 @@ def subsetNetCDF(filepath, bounds, newfilepath=None):
     lon_east = bounds[2]
     lat_north = bounds[3]
 
-    with xr.open_dataset(filepath, engine="h5netcdf") as file:
+    with xr.open_dataset(filepath) as file:
         print(file)
         f = file.load()
         # Values needed for geometry calculations

src/goes_ortho/utils.py

@@ -2,7 +2,7 @@
 
 
 def daytoJulian(year, month, day):
-    from goes_ortho import datetime
+    import datetime
 
     i, j, k = 0, 0, 0
     julianDay = []
@@ -66,15 +66,15 @@ def __isAList(year, month, day, product, hour, channel=None, julianDay=None):
 
 class ProgressPercentage(object):
     def __init__(self, filename, objectSize):
-        from goes_ortho import threading
+        import threading
 
         self._filename = filename
         self._size = objectSize
         self._seen_so_far = 0
         self._lock = threading.Lock()
 
     def __call__(self, bytes_amount):
-        from goes_ortho import sys
+        import sys
 
         # To simplify we'll assume this is hooked up
         # to a single filename.