Fix UP ID manipulation in CX processor

sorgerlab · Sep 20, 2019 · 69bc642 · 69bc642
1 parent b501460
commit 69bc642
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/indra/sources/ndex_cx/processor.py b/indra/sources/ndex_cx/processor.py
@@ -82,9 +82,8 @@ def _initialize_node_agents(self):
         for node in nodes:
             id = node['@id']
             cx_db_refs = self.get_aliases(node)
-            up_id = cx_db_refs.get('UP')
-            up_id = uniprot_client.get_primary_id(up_id)
             node_name = node['n']
+            up_id = cx_db_refs.get('UP')
             if up_id:
                 db_refs = {'UP': up_id, 'TEXT': node_name}
                 hgnc_id = uniprot_client.get_hgnc_id(up_id)