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Megan tutorial dev wrap up #22

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Aug 19, 2024
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Megan tutorial dev wrap up #22

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a144904
wrapped up all notebooks
meganmason Aug 19, 2024
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Merge branch 'megan-tutorial-dev' of https://github.com/meganmason/we…
meganmason Aug 19, 2024
2b182d3
wrapped up all notebooks
meganmason Aug 19, 2024
00a55aa
Merge branch 'main' into megan-tutorial-dev
meganmason Aug 19, 2024
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Merge branch 'main' into megan-tutorial-dev
meganmason Aug 19, 2024
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6 changes: 3 additions & 3 deletions book/tutorials/snowex-core/01_snowex_data_overview.ipynb
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"| **Year** | **Campaign Type** | **Measurement Focus** |\n",
"| :----------- | :--------- |:------------------- |\n",
"| 2017 | IOP | Colorado, focused on multiple instruments in a forest gradient. |\n",
"| 2020 | IOP, TS | Western US, focused on Time Series of L-band InSAR, active/passive microwave for SWE and thermal IR for snow surface temp.|\n",
"| 2021 | TS | Western US, continued Time Series of L-band InSAR, also addressed prairie & snow albedo questions. |\n",
"| 2020 | IOP, TS | Western U.S focused on Time Series of L-band InSAR, active/passive microwave for SWE and thermal IR for snow surface temp.|\n",
"| 2021 | TS | Western U.S, continued Time Series of L-band InSAR, also addressed prairie & snow albedo questions. |\n",
"| 2023 | IOP | Alaska Tundra & Boreal forest, focused on addressing SWE/snow depth and albedo objectives. |\n",
"\n",
"\n",
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"metadata": {},
"source": [
"### Where has SnowEx Been?\n",
"Campaign efforts are focused on various snow climates in the Western United States. SnowEx partnerships and expertise are spread across the U.S and international.\n",
"Campaign efforts are focused on various snow climates in the western United States. SnowEx partnerships and expertise are spread across the U.S and international.\n",
" \n",
"![](./content/01_snowex-map.png)\n",
"**Figure 1.** Map showing the locations of SnowEx field campaign areas (red dot). Base map shows snow classes defined in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml). The snow pit images show a representative pit in each of the class types visited by SnowEx. "
Expand Down Expand Up @@ -117,7 +117,7 @@
"\n",
" \n",
"![](./content/01_map-n-barchart.png)\n",
"**Figure 2.** Map of the in situ field visits for the duration of SnowEx field campaigns (2017-2023). At this scale, points are overlapping, especially in the eastern Rocky Mountain region around Colorado. The total number of unique visits with recorded SWE are listed in the legend. Upper Right Bar chart of snow classes over the four SnowEx field campagin years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occured in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml).\n",

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campagin ==> campaign

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"\n",
"<!-- ![](./content/01_snow-classes-barchart.png)\n",
"**Figure 2.** Bar chart of snow classes over the four SnowEx field campagin years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occured in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml). -->\n",
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85 changes: 40 additions & 45 deletions book/tutorials/snowex-core/02_snowex_data_descriptions.ipynb
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"# Data Descriptions\n",
"(10 minutes)\n",
"\n",
"Campaigns are participant driven and produce community wide data. Without our vast community, we wouldn't have the robust ground-based observations that are part of the SnowEx collection. See the ground-based calibration and validation measurements central to the SnowEx field campaigns."
"Campaigns are participant driven and produce community wide data. Without our vast community, we wouldn't have the robust ground-based observations that are part of the SnowEx collection. Discover the ground-based calibration and validation measurements central to the SnowEx field campaigns. Collecting in situ measurements require hours of manual labor and attention to detail. While observers adhere to standard protocols, they often rely on their best judgment and collective expertise when facing challenging sampling conditions."
]
},
{
Expand All @@ -33,21 +33,22 @@
"### What ground-based data sets are central for snow field campaigns? \n",
"\n",
"![](./content/02_measurement-types.png)\n",
"**Figure 1.** Ground-based measurements central to the SnowEx campaigns. (Left to Right panels) 1). Depth Transects: Observer uses the MagnaProbe to measure snow depths.\n",
"2). Snow Pit: Vertical density cuts show the dual profile sampling protocol. 3). Interval Board/SWE Tube: Overnight snow being measured in a snow tube to record the daily change during the IOP campaign. 4). Specific Surface Area (SSA) being collected at a shallow tundra snow pit with the IceCube. 5). SnowMicroPen (SMP) penatrating the snowpack to record snow stratigraphy over a range of intervals (10-50m) away from the centralized snow pit.\n",
"**Figure 1.** Ground-based measurements central to the SnowEx campaigns. (Left to Right panels) 1). **Depth Transects**: Observer uses the MagnaProbe to measure snow depths.\n",
"2). **Snow Pit**: Vertical density cuts show the dual profile sampling protocol. 3). **Interval Board/SWE Tube**: Overnight snow being measured in a snow tube to record the daily change during the IOP campaign. 4). **Specific Surface Area (SSA)** being collected at a shallow tundra snow pit with the IceCube. 5). **SnowMicroPen (SMP)** penatrating the snowpack to record snow stratigraphy over a range of intervals (10-50m) away from the centralized snow pit.\n",
"\n",
"### Additional detail on depth transects and snow pit sampling procedures\n",
"**Depth Transects**\\\n",
"Here you can see a summary of some of the depth sampling patterns you might discover in the snow depth data sets. Typically the pattern is a result of what instrument collection technique is deployed. \n",
"\n",
"![](./content/02_depth_spirals.png)\n",
"\n",
"**Figure 2.** Examples of snow depth measurements taken in different spatial patterns, representing different spatial extents. a). shows pit-depth, square-depths with L-depths from one of the plots. b). captures spiral-depths collected using a MagnaProbe. c). Includes spiral-depths and a single transect, ~10km in total length. Note the difference in scale across each panel. Background images are courtesy of @ 2020 Maxar Technologies Inc., Alaska Geospatial Office, USGS. \n",
"\n",
"**Figure 2.** Examples of snow depth measurements taken in different spatial patterns, representing different spatial extents. a). shows pit-depth, square-depths with L-depths from a study plot. b). captures spiral-depths collected using a MagnaProbe. c). Includes spiral-depths and a single transect, ~10km in total length. Note the difference in scale across each panel. Background images are courtesy of @ 2020 Maxar Technologies Inc., Alaska Geospatial Office, USGS. \n",
"\n",
"**Snow Pits**\\\n",
"There are a lot of measurements in a single snow pit. This diagram helps explain what all is measured at a snow pit. \n",
"\n",
"![](./content/02_pit-parameters.png)\n",
"**Figure 3.** Description of parameters that come from a single snow pit visit. The colored ovals on the images correspond to the colored measurements on the left side.\n",
"\n",
"_____"
]
},
Expand All @@ -62,29 +63,26 @@
"<!-- <img src='./content/02_matrix.png'> -->\n",
"![](./content/02_matrix.png)\n",
"**Figure 4.** Nine-member snow and vegetation matrix used to sample and name snow pits during the Grand Mesa IOP campaign \n",
" \n",
"\n",
"**Vegetation Classes**\n",
"- 1-3 = treeless (0% tree cover)\n",
"- 4-6 = sparse (1-30% tree cover)\n",
"- 7-9 = dense (31-100% tree cover)\n",
"\n",
"**Snow Depth Classes**\n",
"- 1, 4, 7 = shallow (<90cm)\n",
"- 2, 5, 8 = medium (90-122cm)\n",
"- 2, 5, 8 = medium (90-122cm\n",
"- 3, 6, 9 = deep (>122cm)\n",
"\n",
"**Flight Lines**\n",
"- 'C' = Crossline\n",
"- 'N' = North\n",
"- 'S' = South\n",
" \n",
"\n",
"<!-- <img src='./content/02_GMpitMap.jpg'> -->\n",
"![](./content/02_GMpitMap.jpg)\n",
"\n",
"**Figure 5.** Grand Mesa IOP 2020 sampling design. The rectangles are the lidar, UAVSAR, SWESARR, Thermal IR, and Gamma flight lines. The point markers are the locations of snow pits. \n",
"___\n",
"\n"
"**Figure 5.** Grand Mesa, Colorado IOP 2020 sampling design. The rectangles are the SWESAR, UAVSAR, Thermal IR, and Gamma flight lines. The point markers are the locations of snow pits. \n",
"___"
]
},
{
Expand Down Expand Up @@ -158,7 +156,7 @@
"\n",
"Note - If a site was repeated (e.g. Cameron Pass, Michigan River) then the Pit Count column is the sum of the observations for two years). The Snow Class column was extracted from the 300 m Snow Classification data set (Liston, 2021 and can be accessed [here](https://nsidc.org/data/NSIDC-0768/versions/1) at NSIDC). See the previous notebook to characterize the Snow Classes. \n",
"\n",
"This table can be accessed as a geojson from [Megan's github gists](https://gist.github.com/meganmason/dde13c46a90875e364b1c25a31bff1d8) \n",
"This table can be accessed as a geojson from [Megan's github gists](https://gist.github.com/meganmason/dde13c46a90875e364b1c25a31bff1d8)\n",
"\n",
"To use this as a geojson in your project:\n",
"1. Navigate to the link above\n",
Expand Down Expand Up @@ -191,46 +189,47 @@
"metadata": {},
"source": [
"___\n",
"### III: Arctic Tundra and Boreal Forest, Alaska\n",
"\n",
"\n",
"### III: Arctic Tundra and Boreal Forest, Alaska IOP\n",
"\n",
"![](./content/02_ak-sites.png)\n",
"\n",
"**Figure 6.** SnowEx 2023 site locations in Interior Alaska and on the North Slope of Alaska. The flight lines for SWESARR (turquoise areas) and lidar/stereo (red boxes). SWE/snow depth measurement periods studied 5 locations: 3 in the boreal forest and 2 in the arctic tundra. The albedo/snow melt campaign period studied 3 sites in the boreal forest.\n",
"**Figure 6.** SnowEx 2023 site locations in Interior Alaska (boreal forest) and on the North Slope (tundra) of Alaska. The flight lines for SWESARR (turquoise areas) and lidar/stereo (red boxes). SWE/snow depth measurement periods studied five locations: three in the boreal forest and two in the arctic tundra. The albedo/snow melt campaign period studied three sites in the boreal forest.\n",
"\n",
"#### SWE/snow depth focused campaign (Oct 2022, March 2023, Oct 2023)\n",
"**Fairbanks area / Interior Alaska --> Boreal Forest**\n",
"- FLCF - Farmer’s Loop and Creamer’s Field (001-108)\n",
"- CPCRW - Caribou-Poker Creek Research Watershed (200-283)\n",
"- BCEF - Bonanza Creek Experimental Forest (300-482)\n",
"<br />\n",
"\n",
"**Vegetation Classes** [National Land Cover Dataset](add link)\n",
"- D - Deciduous\n",
"- E - Evergreen\n",
"- S - Shrub\n",
"- W - Wetland\n",
"- C - Crop\n",
">**Vegetation Classes:** [(National Land Cover Dataset)](https://www.mrlc.gov/data/nlcd-2016-land-cover-alaska)\n",
" D - Deciduous,\n",
" E - Evergreen,\n",
" S - Shrub,\n",
" W - Wetland,\n",
" C - Crop\n",
"\n",
">**Snow Depth Classes:**\n",
" B - Below Average,\n",
" N - Average (neutral),\n",
" A - Above Average\n",
"\n",
"**Snow Depth Classes**\n",
"- B - Below Average\n",
"- N - Average (neutral)\n",
"- A - Above Average\n",
"\n",
"**North Slope Alaska --> Arctic Tundra**\n",
"- UKT - Upper Kuparuk-Toolik (500-566)\n",
"- ACP - Alaska Coastal Plain (600-800)\n",
"\n",
"**Vegetation Classes**\n",
"- (Not used for Tundra sites)\n",
"\n",
">**Vegetation Classes**\n",
" (Not used for Tundra sites)\n",
" \n",
"**Snow Depth Classes** (Lidar?? and SnowModel results)\n",
"- N - Neutral (windward)\n",
"- A - Above Neutral (leeward)\n",
"- D - Snow Drift\n",
"- I - Ice Cover (lake/river) - only visited March 2023\n",
">**Snow Depth Classes** (SnowModel terrain, land cover, and snow depth output)<br />\n",
" N - Neutral (windward),\n",
" A - Above Neutral (leeward),\n",
" D - Snow Drift,\n",
" I - Ice Cover (lake/river) - only visited March 2023\n",
"\n",
"**Flight Lines**\n",
"**Flight Lines**<br />\n",
"- FLCF (2): North, SW\n",
"- BCEF (3): NE, SW, North\n",
"- CPCRW (1): East\n",
Expand All @@ -243,25 +242,21 @@
"- CPCRW - Caribou-Poker Creek Research Watershed\n",
"- DEJU - Delta Junction Research Area\n",
"\n",
"\n",
"\n",
"![](./content/02_FLCF-map.jpg)\n",
"**Figure 7.** Farmers Loop Creamers Field (FLCF) field site (one of five SWE/depth focused study sites for the Alaska IOP). Snow pit study plots (colored points) distributed within the SWESARR flight swaths (green rectangle) and lidar flight box (red line). Pit sites are marked with October 2022 (white triangle) and March 2023 (black circle) site visits. \n",
"\n",
"![](./content/02_ak-sites-n-flights.png)\n",
"\n",
"**Figure X.** SWESARR science lines (yellow boxes) and associated flight lines (red line) over each site. \n",
"\n",
"\n",
"<!-- ![](./content/02_ak-codes.png) -->\n",
"\n",
"**Figure 8.** SWESARR science lines (yellow boxes) and associated flight lines (red line) over each site. \n",
"\n",
"\n",
"![](./content/02_ak-boreal-vegclass.png)\n",
"\n",
"**Figure X.** Represenative land cover classes for the boreal forests taken from the Southeast corner of the 5x5 m study plot. \n",
"**Figure 9.** Represenative land cover classes for the boreal forests taken from the Southeast corner of the 5x5 m study plot. \n",
"\n",
"![](./content/02_ak-sampling-design.png)\n",
"\n",
"**Figure X.** The study plot sampling design for the SWE/snow depth focused campaign. Field crews marked the Southeast corner and measured square-depths around the 5x5 m perimeter on a 1m interval. Snow depths were collected on a north and west transect of 20 m (15 m addition to the study plot perimeter) or a spiral pattern was used depending on depth instrument availability. The snow pit was excavated in the center of the study plot. SSA measurements were collected inside the ~1x1 m snow pit. SMP measurments were taken at the front of the snow pit and up to 50 m from the snow pit. \n",
"**Figure 10.** The study plot sampling design for the SWE/snow depth focused campaign. Field crews marked the Southeast corner and measured square-depths around the 5x5 m perimeter on a 1m interval. Snow depths were collected on a north and west transect of 20 m (15 m addition to the study plot perimeter) or a spiral pattern was used depending on depth instrument availability. The snow pit was excavated in the center of the study plot. SSA measurements were collected inside the ~1x1 m snow pit. SMP measurments were taken at the front of the snow pit and up to 50 m from the snow pit. \n",
"\n",
"____"
]
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