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refactor: change colnames of chromatogram() data.frame #97

refactor: change colnames of chromatogram() data.frame

refactor: change colnames of chromatogram() data.frame #97

Triggered via pull request January 29, 2025 10:48
Status Failure
Total duration 30m 58s
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check-bioc.yml

on: pull_request
Matrix: build-check
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2 errors and 18 warnings
macOS-latest (devel)
Process completed with exit code 1.
macOS-latest (devel)
No such keg: /opt/homebrew/Cellar/[email protected]
ubuntu-latest (devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use either v3 or v4 of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-12-05-notice-of-upcoming-releases-and-breaking-changes-for-github-actions/#actions-cache-v1-v2-and-actions-toolkit-cache-package-closing-down
macOS-latest (devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use either v3 or v4 of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-12-05-notice-of-upcoming-releases-and-breaking-changes-for-github-actions/#actions-cache-v1-v2-and-actions-toolkit-cache-package-closing-down
windows-latest (devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use either v3 or v4 of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-12-05-notice-of-upcoming-releases-and-breaking-changes-for-github-actions/#actions-cache-v1-v2-and-actions-toolkit-cache-package-closing-down
macOS-latest (devel)
harfbuzz 10.2.0 is already installed and up-to-date. To reinstall 10.2.0, run: brew reinstall harfbuzz
macOS-latest (devel)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (devel)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (devel)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel)
file 'mzR/cleanup' did not have execute permissions: corrected
windows-latest (devel)
file 'mzR/configure' did not have execute permissions: corrected
windows-latest (devel)
Found the following significant warnings:
windows-latest (devel)
Non-portable flags in variable 'PKG_CPPFLAGS':
windows-latest (devel)
See below...
windows-latest (devel)
Non-portable flags in variable 'PKG_CPPFLAGS':
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5: