Update dependency scikit-image to v0.25.0 #565
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This PR contains the following updates:
0.24.0->0.25.0Release Notes
scikit-image/scikit-image (scikit-image)
v0.25.0Compare Source
scikit-image 0.25.0
We're happy to announce the release of scikit-image 0.25.0!
New Features
skimage.feature.texture.graycoprops(#7375).skimage.morphology.footprint_rectanglesupporting generation of rectangular or hyper-rectangular footprints in one function (#7566).API Changes
skimage.feature.plot_matches. Useskimage.feature.plot_matched_featuresgoing forward (#7487).skimage.io.imshow,skimage.io.imshow_collectionandskimage.io.show. Please usematplotlib,napari, etc. to visualize images (#7508).skimage.morphology.skeletonize_3d; useskimage.morphology.skeletonizeinstead (#7572).skimage.ioplugin infrastructure (#7353).scipy.sparsearray interface. For more details, see the note about the newscipy.sparsearray interface here (#7576).skimage.morphology.rectanglein favor of the new functionskimage.morphology.footprint_rectangle(#7566).skimage.morphology.squarein favor of the new functionskimage.morphology.footprint_rectangle(#7566).skimage.morphology.cubein favor of the new functionskimage.morphology.footprint_rectangle(#7566).Enhancements
skimage.morphology.local_minimafor extremely small floats (#7534).skimage.feature.plot_matched_featuresuses the same random colors, ifmatches_colorisn't provided explicitly (#7541).matches_colorinskimage.feature.plot_matched_features(#7541).Performance
skimage.feature.peak_local_maxwill now skip unnecessary distance computations in the case ofmin_distance=1. This results in performance improvements to functions likeskimage.feature.blob_dog,skimage.feature.blob_log,skimage.feature.blob_dohandskimage.feature.corner_peaksthat callpeak_local_maxinternally (#7548).skimage.featurepeak_local_max, skip unnecessary check for cases wheremin_distance > 1is passed (#7548).Bug Fixes
skimage.morphology.remove_objects_by_distancedoesn't fail if the given integer dtype cannot be safely cast to the architecture specific size ofintp, e.g. on i386 architectures (#7453).skimage.draw.ellipsoid_statswhen all semi-axes have the same length (#7473).skimage.morphology.thinfrom accidentally modifying the input image in case it is of dtype uint8 (#7469).skimage.measure.ransac. In some cases,ransacwas stopping at the first iteration (#7065).skimage.measure.ransac; very small probabilities lead to -0 number of max trials (#7496).RegionPropertiesobjects returned byskimage.measure.regionpropscan be deserialized with pickle (#7569).watershed_lines=Trueinskimage.segmentation.watershedresulted in an incorrect solution (#7071).skimage.segmentation.watershedwhen the markers don't align with local minima by making sure every marker is evaluated before successive pixels (#7071).skimage.segmentation.join_segmentationsifnumpy.uintis used with NumPy<2 (#7292).Documentation
skimage.morphology.skeletonize, clarify the expected image dtypes and how objects of different intensities are handled (#7456).skimage.feature.graycomatrix(#7297).CITATION.cffinstead ofCITATION.bib(#7505).spin test --coveragein contribution guide (#7515).imageparameter inskimage.restoration.richardson_lucy(#7477).radiusinskimage.morphology.ballfrominttofloat(#7627).Infrastructure
currentmoduledirective again (#7492).type:label is present in PRs (#7512).s_cmpunresolved symbol error, update Emscripten CI testing (#7525).Maintenance
spin sdist(#7438).Rotation.from_eulerto compute 3D rotation matrix (#7503).lazy_loaderas private symbol in top-level namespaces (#7540).io.showandio.imshow(#7556).assert_stacklevel(#7558).changelistto v0.5 (#7601).intersphinx_registrypackage inconf.pyto keep intersphinx urls up to date. This means that building docs now requires theintersphinx-registrypackage (#7611).square,cube&rectangle(#7624).skimagetop module (#6892).Contributors
30 authors added to this release (alphabetically):
25 reviewers added to this release (alphabetically):
These lists are automatically generated, and may not be complete or may contain duplicates.
Configuration
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