We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
scRNA.sub =subset(scRNAnew, downsample=30) ,argument "downsample" didn't work,what ‘s wrong?
Idents(scRNAnew) = "celltype" scRNA.sub =subset(scRNAnew, downsample=30) # downsample函数实现分层抽样 每个细胞类型抽200个 scRNA.sub An object of class Seurat 29984 features across 300 samples within 2 assays Active assay: RNA (27984 features, 0 variable features) 1 other assay present: integrated 3 dimensional reductions calculated: pca, umap, tsne table(scRNA.sub$celltype)
Fibroblasts NK_cells T_cells Epithelial_cells Macrophages 89 88 23 31 25 Monocytes Plasma_cells SMC Endothelial_cells B_cells 13 10 8 11 2
The text was updated successfully, but these errors were encountered:
No branches or pull requests
scRNA.sub =subset(scRNAnew, downsample=30) ,argument "downsample" didn't work,what ‘s wrong?
Idents(scRNAnew) = "celltype"
scRNA.sub =subset(scRNAnew, downsample=30) # downsample函数实现分层抽样 每个细胞类型抽200个
scRNA.sub
An object of class Seurat
29984 features across 300 samples within 2 assays
Active assay: RNA (27984 features, 0 variable features)
1 other assay present: integrated
3 dimensional reductions calculated: pca, umap, tsne
table(scRNA.sub$celltype)
Fibroblasts NK_cells T_cells Epithelial_cells Macrophages
89 88 23 31 25
Monocytes Plasma_cells SMC Endothelial_cells B_cells
13 10 8 11 2
The text was updated successfully, but these errors were encountered: