OZ-742: Added Bahmni EMR to Ozone.

.env

@@ -14,6 +14,94 @@ HOST_URL=${SERVER_SCHEME}://${HOST_NAME}
 TIMEZONE=UTC
 GITPOD_ENV=false
 ENABLE_SSO=false
+
+# Bahmni EMR
+
+RUN_WITH_BAHMNI_EMR=false
+BAHMNI_TEST_ORDER_TYPE_UUID=f8ae333e-9d1a-423e-a6a8-c3a0687ebcf2
+
+# Mail Config Properties Environment Variables
+MAIL_TRANSPORT_PROTOCOL=smtps
+MAIL_SMTP_AUTH=true
+MAIL_SMTP_STARTTLS_ENABLE=true
+MAIL_SMTP_SSL_ENABLE=true
+MAIL_DEBUG=false
+SEND_MAIL=false
+MAIL_FROM=
+MAIL_SMTP_HOST=
+MAIL_SMTP_PORT=
+MAIL_USER=
+MAIL_PASSWORD=
+
+# Bahmni Config Environment Variables
+BAHMNI_CONFIG_IMAGE_TAG=1.0.0
+BAHMNI_CONFIG_VOLUME=bahmni-config
+BAHMNI_CONFIG_OVERRIDE_PATH=
+
+# Bahmni - OpenMRS Environment Variables
+OPENMRS_HOST=openmrs
+OPENMRS_PORT=8080
+OPENMRS_IMAGE_TAG=1.1.1
+OPENMRS_DB_IMAGE_NAME=bahmni/openmrs-db:1.0.0-standard
+OPENMRS_DB_NAME=openmrs
+OPENMRS_DB_HOST=openmrsdb
+OPENMRS_DB_USERNAME=openmrs-user
+OPENMRS_DB_PASSWORD=password
+OPENMRS_DB_SQL_MODES='STRICT_TRANS_TABLES,NO_ZERO_IN_DATE,NO_ZERO_DATE,ERROR_FOR_DIVISION_BY_ZERO,NO_ENGINE_SUBSTITUTION'
+OPENMRS_DB_CREATE_TABLES='true'
+OPENMRS_DB_AUTO_UPDATE='true'
+OPENMRS_MODULE_WEB_ADMIN='false'
+# OMRS_DEV_DEBUG_PORT=
+OMRS_JAVA_SERVER_OPTS=''
+OMRS_JAVA_MEMORY_OPTS=''
+OPENMRS_UPLOAD_FILES_PATH=./openmrs-uploads
+BAHMNI_OPENMRS_MODULES_PATH=
+OPENMRS_DB_TYPE=mysql
+OMRS_C3P0_MAX_SIZE=50
+WEIGHT_CONCEPT_UUID=5089AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
+HEIGHT_CONCEPT_UUID=5090AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
+OPENMRS_DOCKER_ENV='true'
+OMRS_DB_EXTRA_ARGS="&zeroDateTimeBehavior=convertToNull"
+LUCENE_MATCH_TYPE="START"
+DOCUMENT_MAX_SIZE_MB=
+
+# Bahmni Web Environment Variables
+BAHMNI_WEB_IMAGE_TAG=1.1.0
+BAHMNI_APPS_PATH=
+
+# Implementer Interface Environment Variables
+IMPLEMENTER_INTERFACE_IMAGE_TAG=1.1.1
+IMPLEMENTER_INTERFACE_CODE_PATH=
+
+# Bahmni Reports Environment Variables
+REPORTS_DB_IMAGE_NAME=mysql:8.0
+REPORTS_DB_NAME=bahmni_reports
+REPORTS_DB_USERNAME=reports-user
+REPORTS_DB_PASSWORD=password
+REPORTS_IMAGE_TAG=1.1.0
+
+#Patient Documents environmental variables
+PATIENT_DOCUMENTS_TAG=1.1.1
+
+#Appointments environmental variables
+APPOINTMENTS_IMAGE_TAG=1.1.1
+APPOINTMENTS_PATH=
+
+#SMS-service Environment Variables
+SMS_SERVICE_IMAGE_TAG=1.1.0
+SMS_TOKEN=
+SMS_ORIGINATOR=
+SMS_PROVIDER_API="https://api.d7networks.com/messages/v1/send"
+SMS_COUNTRY_CODE=
+
+IPD_TAG=1.0.0
+IPD_PATH=
+
+# SNOMED-ICD10 Reporting
+ICD10_LITE_INDICATOR=true
+
+# O3 EMR
+
 #
 # OpenMRS
 #
@@ -98,12 +186,12 @@ KEYCLOAK_BINARIES_PATH=
 RESULTS_ENCOUNTER_TYPE_UUID=3596fafb-6f6f-4396-8c87-6e63a0f1bd71
 CONCEPT_COMPLEX_UUID=b16066fa-6291-4375-3a39-f9f987320f88
 OPENMRS_IDENTIFIER_TYPE_UUID=05a29f94-c0ed-11e2-94be-8c13b969e334
+EIP_TEST_ORDER_TYPE_UUID=
 
 # EIP client SENAITE
 EIP_DB_NAME_SENAITE=openmrs_eip_mgt_senaite
 EIP_DB_USER_SENAITE=openmrs_eip_mgt_senaite
 EIP_DB_PASSWORD_SENAITE=password
-BAHMNI_TEST_ORDER_TYPE_UUID=7a82584d-7523-11eb-8077-0242ac120009
 DB_EVENT_DESTINATIONS_SENAITE=direct:openmrs-to-senaite-event-listener
 
 # EIP client Odoo
@@ -135,6 +223,13 @@ EIP_DB_PASSWORD_ERPNEXT=password
 #
 NUMBER_OF_DEMO_PATIENTS=
 
+#
+# EIP Bahmni
+#
+EIP_DB_NAME_BAHMNI=openmrs_eip_mgt_bahmni
+EIP_DB_USER_BAHMNI=openmrs_eip_mgt_bahmni
+EIP_DB_PASSWORD_BAHMNI=password
+
 #
 # Mounts
 # Volumes are mapped to the Ozone distro output folders

docker-compose-bahmniemr.yml

@@ -0,0 +1,262 @@
+x-default-logging: &default
+  {}
+
+x-log-config: &log-config
+  <<: *default
+
+services:
+
+  bahmni-config:
+    image: 'bahmni/standard-config:${BAHMNI_CONFIG_IMAGE_TAG:?}'
+    volumes:
+      - '${BAHMNI_CONFIG_VOLUME:?}:/usr/local/bahmni_config'
+      - '${BAHMNI_CONFIG_OVERRIDE_PATH:-bahmni-config-override}:/usr/local/bahmni_config_override'
+    logging: *log-config
+    restart: unless-stopped
+    networks:
+      - ozone
+    command: ["sh", "-c", "rm -rf /etc/bahmni_config/masterdata/configuration && cp -r /usr/local/bahmni_config_override/frontend/* /etc/bahmni_config/openmrs && ./start.sh"]
+
+  openmrs:
+    image: bahmni/openmrs:${OPENMRS_IMAGE_TAG:?}
+    environment:
+      TZ: ${TIMEZONE}
+      OMRS_DB_NAME: ${OPENMRS_DB_NAME:?}
+      OMRS_DB_HOSTNAME: ${OPENMRS_DB_HOST:?}
+      OMRS_DB_USERNAME: ${OPENMRS_DB_USER:?}
+      OMRS_DB_PASSWORD: ${OPENMRS_DB_PASSWORD:?}
+      OMRS_CREATE_TABLES: ${OPENMRS_DB_CREATE_TABLES}
+      OMRS_AUTO_UPDATE_DATABASE: ${OPENMRS_DB_AUTO_UPDATE}
+      OMRS_MODULE_WEB_ADMIN: ${OPENMRS_MODULE_WEB_ADMIN}
+      # OMRS_DEV_DEBUG_PORT: ${OMRS_DEV_DEBUG_PORT}
+      OMRS_JAVA_SERVER_OPTS: ${OMRS_JAVA_SERVER_OPTS}
+      OMRS_JAVA_MEMORY_OPTS: ${OMRS_JAVA_MEMORY_OPTS}
+      SEND_MAIL: ${SEND_MAIL}
+      MAIL_TRANSPORT_PROTOCOL: ${MAIL_TRANSPORT_PROTOCOL}
+      MAIL_SMTP_HOST: ${MAIL_SMTP_HOST}
+      MAIL_SMTP_PORT: ${MAIL_SMTP_PORT}
+      MAIL_SMTP_AUTH: ${MAIL_SMTP_AUTH}
+      MAIL_SMTP_STARTTLS_ENABLE: ${MAIL_SMTP_STARTTLS_ENABLE}
+      MAIL_SMTP_SSL_ENABLE: ${MAIL_SMTP_SSL_ENABLE}
+      MAIL_DEBUG: ${MAIL_DEBUG}
+      MAIL_FROM: ${MAIL_FROM}
+      MAIL_USER: ${MAIL_USER}
+      MAIL_PASSWORD: ${MAIL_PASSWORD}
+      OMRS_DOCKER_ENV: ${OPENMRS_DOCKER_ENV}
+      OMRS_C3P0_MAX_SIZE: ${OMRS_C3P0_MAX_SIZE}
+      WEIGHT_CONCEPT_UUID: ${WEIGHT_CONCEPT_UUID}
+      HEIGHT_CONCEPT_UUID: ${HEIGHT_CONCEPT_UUID}
+      OMRS_DB_EXTRA_ARGS: ${OMRS_DB_EXTRA_ARGS}
+      LUCENE_MATCH_TYPE: ${LUCENE_MATCH_TYPE}
+      DOCUMENT_MAX_SIZE_MB: ${DOCUMENT_MAX_SIZE_MB}
+    #ports:
+      # - ${OMRS_DEV_DEBUG_PORT}:${OMRS_DEV_DEBUG_PORT}
+    volumes:
+      - "${BAHMNI_CONFIG_VOLUME:?}:/etc/bahmni_config/:ro"
+      - "bahmni-lab-results:/home/bahmni/uploaded_results"
+      - "bahmni-uploaded-files:/home/bahmni/uploaded-files"
+      - "${BAHMNI_OPENMRS_MODULES_PATH:?}/:/openmrs/distribution/openmrs_modules/"
+      - 'bahmni-patient-images:/home/bahmni/patient_images'
+      - 'bahmni-document-images:/home/bahmni/document_images'
+      - 'bahmni-clinical-forms:/home/bahmni/clinical_forms'
+      - "${BAHMNI_CONFIG_OVERRIDE_PATH:-openmrs-config}/initializer:/openmrs/distribution/openmrs_config/"
+      - 'configuration_checksums:/openmrs/data/configuration_checksums'
+      - 'sms-token:/openmrs/data/sms-token'
+    depends_on:
+      - mysql
+    logging: *log-config
+    restart: unless-stopped
+    healthcheck:
+      test: [ "CMD", "curl", "-f", "http://localhost:8080/openmrs/index.htm" ]
+      interval: 10s
+      timeout: 5s
+      retries: 360
+      start_period: 180s
+    networks:
+      - ozone
+
+  # Bahmni EIP routes
+  eip-bahmni:
+    depends_on:
+      env-substitution:
+        condition: service_completed_successfully
+      openmrs:
+        condition: service_healthy
+      mysql:
+        condition: service_started
+    environment:
+      - EIP_PROFILE=prod
+      - EIP_DB_NAME_BAHMNI=${EIP_DB_NAME_BAHMNI}
+      - EIP_DB_USER_BAHMNI=${EIP_DB_USER_BAHMNI}
+      - EIP_DB_PASSWORD_BAHMNI=${EIP_DB_PASSWORD_BAHMNI}
+      - MYSQL_ADMIN_USER=root
+      - MYSQL_ADMIN_USER_PASSWORD=${MYSQL_ROOT_PASSWORD}
+      - OPENMRS_DB_HOST=${OPENMRS_DB_HOST}
+      - OPENMRS_DB_PORT=${OPENMRS_DB_PORT}
+      - OPENMRS_DB_NAME=${OPENMRS_DB_NAME}
+      - OPENMRS_DB_USER=${OPENMRS_DB_USER}
+      - OPENMRS_DB_PASSWORD=${OPENMRS_DB_PASSWORD}
+      - BAHMNI_TEST_ORDER_TYPE_UUID=${BAHMNI_TEST_ORDER_TYPE_UUID}
+    image: mekomsolutions/eip-client:sha-b2f32ae
+    networks:
+      ozone:
+        aliases:
+          - eip-client-bahmni
+    restart: unless-stopped
+    volumes:
+      # - "${EIP_BAHMNI_ROUTES_PATH}:/eip-client/routes"
+      # - "${EIP_BAHMNI_ROUTES_PATH}:/eip-client/config"
+      - "${BAHMNI_CONFIG_OVERRIDE_PATH:-bahmni-eip}/eip/routes:/routes"
+      - "${BAHMNI_CONFIG_OVERRIDE_PATH:-bahmni-eip}/eip/config:/config"
+      - eip-home-bahmni:/eip-home
+
+  mysql:
+    environment:
+      OPENMRS_DB_NAME: ${OPENMRS_DB_NAME}
+      OPENMRS_DB_USER: ${OPENMRS_DB_USER}
+      OPENMRS_DB_PASSWORD: ${OPENMRS_DB_PASSWORD}
+      EIP_DB_NAME_BAHMNI: ${EIP_DB_NAME_BAHMNI}
+      EIP_DB_USER_BAHMNI: ${EIP_DB_USER_BAHMNI}
+      EIP_DB_PASSWORD_BAHMNI: ${EIP_DB_PASSWORD_BAHMNI}
+    volumes:
+      - "${SQL_SCRIPTS_PATH}/mysql/openmrs:/docker-entrypoint-initdb.d/db/openmrs"
+      - "${SQL_SCRIPTS_PATH}/mysql/eip-bahmni:/docker-entrypoint-initdb.d/db/eip-bahmni"
+    # command: 
+    #   - "--sql-mode=STRICT_TRANS_TABLES,NO_ZERO_IN_DATE,NO_ZERO_DATE,ERROR_FOR_DIVISION_BY_ZERO,NO_ENGINE_SUBSTITUTION"
+    logging: *log-config
+
+  bahmni-web:
+    image: bahmni/bahmni-web:${BAHMNI_WEB_IMAGE_TAG:?}
+    volumes:
+      - "${BAHMNI_CONFIG_VOLUME:?}:/usr/local/apache2/htdocs/bahmni_config/:ro"
+    #   - "${BAHMNI_APPS_PATH:?}/ui/app/:/usr/local/apache2/htdocs/bahmni"
+    #   - "${BAHMNI_APPS_PATH:?}/ui/node_modules/@bower_components/:/usr/local/apache2/htdocs/bahmni/components"
+    logging: *log-config
+    restart: unless-stopped
+    networks:
+      - ozone
+
+  implementer-interface:
+    image: bahmni/implementer-interface:${IMPLEMENTER_INTERFACE_IMAGE_TAG:?}
+    #volumes:
+    #  - "${IMPLEMENTER_INTERFACE_CODE_PATH:?}/dist:/usr/local/apache2/htdocs/implementer_interface"
+    depends_on:
+      - openmrs
+    logging: *log-config
+    restart: unless-stopped
+    networks:
+      - ozone
+
+  reports:
+    image: bahmni/reports:${REPORTS_IMAGE_TAG:?}
+    environment:
+      TZ: ${TIMEZONE}
+      OPENMRS_DB_HOST: ${OPENMRS_DB_HOST:?}
+      OPENMRS_DB_NAME: ${OPENMRS_DB_NAME:?}
+      OPENMRS_DB_USERNAME: root
+      OPENMRS_DB_PASSWORD: ${MYSQL_ROOT_PASSWORD:?}
+      OPENMRS_HOST: ${OPENMRS_HOST:?}
+      OPENMRS_PORT: ${OPENMRS_PORT:?}
+      REPORTS_DB_SERVER: reportsdb
+      REPORTS_DB_NAME: ${REPORTS_DB_NAME:?}
+      REPORTS_DB_USERNAME: ${REPORTS_DB_USERNAME:?}
+      REPORTS_DB_PASSWORD: ${REPORTS_DB_PASSWORD:?}
+      ODOO_DB_SERVER: ${POSTGRES_DB_HOST:?}
+      ODOO_DB_NAME: ${ODOO_DATABASE:?}
+      ODOO_DB_USERNAME: ${ODOO_DB_USER:?}
+      ODOO_DB_PASSWORD: ${ODOO_DB_PASSWORD:?}
+      ICD10_LITE_INDICATOR: ${ICD10_LITE_INDICATOR}
+    volumes:
+      - "${BAHMNI_CONFIG_VOLUME:?}:/etc/bahmni_config/:ro"
+      - "bahmni-queued-reports:/home/bahmni/reports"
+    # - "../snomed-resources/icd10-extensions-1.0.0-SNAPSHOT.jar:/var/run/bahmni-reports/bahmni-reports/WEB-INF/lib/icd10-extensions-1.0.0-SNAPSHOT.jar:ro"
+    depends_on:
+      - reportsdb
+      - mysql
+      - bahmni-web
+    logging: *log-config
+    restart: unless-stopped
+    networks:
+      - ozone
+
+  reportsdb:
+    platform: linux/amd64
+    image: ${REPORTS_DB_IMAGE_NAME:?}
+    environment:
+      TZ: ${TIMEZONE}
+      MYSQL_ROOT_PASSWORD: ${MYSQL_ROOT_PASSWORD:?}
+      MYSQL_DATABASE: ${REPORTS_DB_NAME:?}
+      MYSQL_USER: ${REPORTS_DB_USERNAME:?}
+      MYSQL_PASSWORD: ${REPORTS_DB_PASSWORD:?}
+    volumes:
+      - 'reportsdbdata:/var/lib/mysql'
+    logging: *log-config
+    restart: unless-stopped
+    networks:
+      - ozone
+
+  patient-documents:
+    image: 'bahmni/patient-documents:${PATIENT_DOCUMENTS_TAG:?}'
+    volumes:
+      - 'bahmni-document-images:/usr/share/nginx/html/document_images'
+      - 'bahmni-lab-results:/usr/share/nginx/html/uploaded_results'
+      - "bahmni-uploaded-files:/usr/share/nginx/html/uploaded-files"
+    environment:
+      TZ: ${TIMEZONE}
+      OPENMRS_HOST: ${OPENMRS_HOST:?}
+    depends_on:
+      - openmrs
+    logging: *log-config
+    restart: unless-stopped
+    networks:
+      - ozone
+
+  appointments:
+    image: bahmni/appointments:${APPOINTMENTS_IMAGE_TAG:?}
+    restart: unless-stopped
+    # volumes:
+    # - "${APPOINTMENTS_PATH:?}/dist/:/usr/local/apache2/htdocs/appointments"
+    networks:
+      - ozone
+
+  sms-service:
+    image: bahmni/sms-service:${SMS_SERVICE_IMAGE_TAG:?}
+    restart: unless-stopped
+    environment:
+      TZ: ${TIMEZONE}
+      SMS_TOKEN: ${SMS_TOKEN}
+      SMS_ORIGINATOR: ${SMS_ORIGINATOR}
+      SMS_PROVIDER_API: ${SMS_PROVIDER_API}
+      SMS_OPENMRS_HOST: ${OPENMRS_HOST:?}
+      SMS_OPENMRS_PORT: ${OPENMRS_PORT:?}
+      SMS_COUNTRY_CODE: ${SMS_COUNTRY_CODE}
+    volumes:
+      - 'sms-token:/opt/tokens'
+    networks:
+      - ozone
+
+  ipd:
+    image: bahmni/microfrontend-ipd:${IPD_TAG:?}
+    container_name: ipd
+    restart: unless-stopped
+    # volumes:
+    #   - "${IPD_PATH:?}/dist/federation/:/usr/local/apache2/htdocs/ipd"
+    logging: *log-config
+    networks:
+      - ozone
+
+volumes:
+  eip-home-bahmni:
+  openmrs-data:
+  openmrsdbdata:
+  bahmni-config-override: ~
+  bahmni-patient-images:
+  bahmni-document-images:
+  bahmni-clinical-forms:
+  bahmni-config:
+  bahmni-lab-results:
+  bahmni-uploaded-files:
+  configuration_checksums:
+  sms-token:
+  bahmni-queued-reports:
+  reportsdbdata:

docker-compose-senaite.yml

@@ -68,6 +68,8 @@ services:
       - EIP_FHIR_SERVER_URL=http://openmrs:8080/openmrs/ws/fhir2/R4
       - EIP_FHIR_USERNAME=${OPENMRS_USER}
       - EIP_FHIR_PASSWORD=${OPENMRS_PASSWORD}
+      - RUN_WITH_BAHMNI_EMR=${RUN_WITH_BAHMNI_EMR}
+      - EIP_TEST_ORDER_TYPE_UUID=${EIP_TEST_ORDER_TYPE_UUID}
     image: mekomsolutions/eip-client
     networks:
       ozone: