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manifest: use new repo configs when serializing manifests
Pass down the repository configurations we get from osbuild-depsolve-dnf into the manifest serialization functions. These repositories are used to add gpg keys to import for each rpm stage in a pipeline. The repository configurations are appended to the ones already defined in each pipeline before serialization. This will duplicate repositories in each pipeline, effectively duplicating gpg key importing. This wont have any effect on the build or the final image.
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