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    74 repositories

    • distributions

      Public
      Makefile
      •
      BSD 3-Clause "New" or "Revised" License
      •5•1•5•2•Updated Jan 9, 2025Jan 9, 2025

    • library

      Public
      A website for sharing QIIME 2 Plugins
      Svelte
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•3•0•Updated Jan 9, 2025Jan 9, 2025

    • q2-vsearch

      Public
      vsearch plugin for QIIME 2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•6•10•2•Updated Jan 8, 2025Jan 8, 2025

    • q2-vizard

      Public
      The first choice of wizard lizards for interactive, generalized microbiome data visualization!
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •9•1•6•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-types

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •41•17•26•4•Updated Jan 8, 2025Jan 8, 2025

    • q2-taxa

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •29•3•43•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-stats

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•1•2•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-sample-classifier

      Public
      QIIME 2 plugin for machine learning prediction of sample data.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •36•6•15•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-quality-filter

      Public
      Quality filtering for QIIME2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •16•1•3•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-quality-control

      Public
      A QIIME 2 plugin for quality control of sequence and feature data
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•4•8•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-phylogeny

      Public
      Phylogenetic reconstruction, and operations on phylogenetic trees.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •19•4•2•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-mystery-stew

      Public
      This plugin exists to define integration tests between interfaces and the framework.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •6•0•0•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-metadata

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•3•6•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-longitudinal

      Public
      QIIME 2 plugin for paired sample comparisons
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•9•30•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-fragment-insertion

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•13•11•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-feature-table

      Public
      QIIME 2 plugin supporting operations on feature tables.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •37•2•25•2•Updated Jan 8, 2025Jan 8, 2025

    • q2-feature-classifier

      Public
      QIIME 2 plugin supporting taxonomic classification
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •38•18•8•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-emperor

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •22•1•4•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-diversity-lib

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•0•6•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-diversity

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •45•4•45•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-demux

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•0•11•2•Updated Jan 8, 2025Jan 8, 2025

    • q2-deblur

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •22•2•7•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-dada2

      Public
      QIIME 2 plugin wrapping DADA2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •36•19•10•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-cutadapt

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•3•3•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-composition

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •27•6•7•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-alignment

      Public
      Support for multiple sequence alignment in QIIME 2.
      hacktoberfest
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •21•2•7•0•Updated Jan 8, 2025Jan 8, 2025

    • q2templates

      Public
      Design template package for QIIME 2 Plugins
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •15•4•0•0•Updated Jan 4, 2025Jan 4, 2025

    • q2galaxy

      Public
      Generate Galaxy tool descriptions automatically from QIIME 2 actions.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•19•10•0•Updated Jan 4, 2025Jan 4, 2025

    • q2cli

      Public
      Command line interface for QIIME 2
      hacktoberfestq2interface
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •24•19•14•1•Updated Jan 4, 2025Jan 4, 2025

    • qiime2

      Public
      Official repository for the QIIME 2 framework.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •242•483•63•6•Updated Jan 4, 2025Jan 4, 2025