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    41 repositories

    • Harmonization-Dataset

      Public
      The harmonization dataset contains 1,378 CT image series from 649 scans, published as a TCIA collection. This repository includes the source code used for processing and computing performance, published in conjunction with the related publication titled: "A Multi-Centric Anthropomorphic 3D CT Phantom-Based Benchmark Dataset for Harmonization."
      Python
      •0•0•0•0•Updated Dec 4, 2024Dec 4, 2024

    • MuSTMIL

      Public
      Python
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • HE_adversarial_CNN

      Public
      Python
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • Multiple_Instance_Learning_instance_based

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • Semi_Supervised_Learning

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • multimodal_learning

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • Data_Driven_Color_Augmentation

      Public
      Python
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • quantimage2-frontend

      Public
      React Frontend for the QuantImage v2 Platform
      JavaScript
      •1•0•0•0•Updated Aug 24, 2024Aug 24, 2024

    • quantimage2_backend

      Public
      Backend of the QuantImage v2 Platform
      JavaScript
      •1•0•0•0•Updated Jul 2, 2024Jul 2, 2024

    • quantimage-v2-info

      Public
      A One-Stop Tool for Clinical Radiomics Research
      HTML
      •0•0•0•0•Updated Apr 22, 2024Apr 22, 2024

    • nifti-to-seg

      Public
      Script allowing to convert a NIfTI file with ROIs to the DICOM SEG format.
      Python
      •
      MIT License
      •1•1•0•0•Updated Dec 14, 2023Dec 14, 2023

    • concept_discovery_svd

      Public
      Automatic identification of regions in the latent space of a model that correspond to unique concepts, namely to concepts with a semantically distinct meaning.
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Nov 22, 2023Nov 22, 2023

    • EResamont2

      Public
      JavaScript
      •2•0•0•0•Updated Oct 9, 2023Oct 9, 2023

    • kheops

      Public
      Java
      •14•0•0•0•Updated Jul 24, 2023Jul 24, 2023

    • quantimage2-kheops

      Public
      Customized Kheops Docker Compose files for the QuantImage v2 platform
      0•0•0•0•Updated Jul 3, 2023Jul 3, 2023

    • quantimage2-setup

      Public
      Setup scripts to create a new instance of the QuantImage v2 Platform
      Shell
      •1•1•0•0•Updated Jun 2, 2023Jun 2, 2023

    • multitask_adversarial

      Public
      Repository for our work on multi task adversarial CNNs
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Apr 19, 2023Apr 19, 2023

    • iMIMIC-RCVs

      Public
      This repository contains the code for implementing Bidirectional Relevance scores for Digital Histopathology, which was used for the results in the iMIMIC workshop paper: Regression Concept Vectors for Bidirectional Explanations in Histopathology
      bidirectional-relevance-scoresconcept-measuresregression-concept-vectors
      Python
      •
      MIT License
      •6•16•0•2•Updated Mar 24, 2023Mar 24, 2023

    • PROCESS_L1

      Public
      UC1 for PROCESS-project. The use case tackles cancer detection and tissue classification on the latest challenges in cancer research using histopathology images, such as CAMELYON and TUPAC.
      tissue-classificationwsis
      Python
      •
      MIT License
      •5•3•0•1•Updated Mar 24, 2023Mar 24, 2023

    • fitnesscheck-template

      Public
      Starter project for the 645-1 module
      JavaScript
      •2•1•0•0•Updated Feb 24, 2023Feb 24, 2023

    • mapathon

      Public
      Mapathon sample React frontend
      JavaScript
      •5•0•0•22•Updated Jan 4, 2023Jan 4, 2023

    • IMVIP2019

      Public
      This reporitory contains the code for replicating the experiments in "Visualizing and interpreting feature reuse of pretrained CNNs for histopathology", submitted as a short abstract at IMVIP2019.
      Jupyter Notebook
      •1•0•0•0•Updated Nov 22, 2022Nov 22, 2022

    • health-prevention-template

      Public
      Starter project for the 645-1 module
      JavaScript
      •8•2•0•2•Updated Nov 11, 2022Nov 11, 2022

    • interpretableWSItoRNAseq

      Public
      An interpretable approach based on trainable attention that identifies which regions in H&E slides of colorectal cancer are the most informative about RNA transcriptomics
      Python
      •
      MIT License
      •1•0•0•0•Updated Aug 9, 2022Aug 9, 2022

    • QRFinges

      Public
      Projet HES 646-2 - Projet de développement d'une application mobile de collecte de données géographique
      JavaScript
      •3•0•0•0•Updated Jul 29, 2022Jul 29, 2022

    • quantimage-melampus

      Public
      Machine learning infrastracture for SPHN/Imagine project
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Mar 7, 2022Mar 7, 2022

    • pfyn-finges-template

      Public
      Starter project for the 645-1 module
      JavaScript
      •3•0•0•0•Updated Sep 28, 2021Sep 28, 2021

    • pfyn-finges-permissions

      Public
      Permissions Manager for the Pfyn-Finger 645 Project
      JavaScript
      •0•0•0•0•Updated Sep 27, 2021Sep 27, 2021

    • weall-chat-template

      Public
      Starter project for the 645-1 module
      JavaScript
      •2•0•0•1•Updated Jun 15, 2021Jun 15, 2021

    • intro-interpretableAI

      Public
      Repository of the main source code for the assignments of the "Introduction to interpretable AI" course
      Jupyter Notebook
      •
      MIT License
      •2•0•0•0•Updated Jun 14, 2021Jun 14, 2021