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patchkernel: improve adaption/partitioning tracking #370

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patchkernel: improve adaption/partitioning tracking #370

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244dff8
containers/piercedVector: properly release memory of holes' storage
andrea-iob Jan 10, 2023
bef7efb
PABLO: mark octants as "new for refinement" only if they are generate…
andrea-iob Feb 3, 2023
cc4df1a
patchkernel: fix comments
andrea-iob Jan 7, 2023
e4a11f7
patchkernel: rename some variables
andrea-iob Jan 7, 2023
0755fa1
patchkernel: update Doxygen documentation
andrea-iob Aug 1, 2023
6110c70
patchkernel: no need to prune the interfaces before resetting them
andrea-iob Jan 7, 2023
d7a61bf
patchkernel: clear list of altered interfaces after resetting them
andrea-iob Jan 7, 2023
e2ef872
patchkernel: add functions to get vertices/interfaces that are on som…
andrea-iob Jan 30, 2023
d2a46ef
patchkernel: rework collection for storing adaption information
andrea-iob Jan 31, 2023
82fbd37
volcartesian: remove unneeded overload of resetInterfaces function
andrea-iob Jan 7, 2023
ea4eef7
voloctree: rename some variables
andrea-iob Jan 7, 2023
61d20b0
voloctree: rework patch synchronization
andrea-iob Feb 3, 2023
3510f68
patchkernel: add tracking of ghost cells during adaptation/partitioning
andrea-iob Jan 23, 2023
feecfb2
patchkernel: add tracking of vertices during adaptation/partitioning
andrea-iob Jan 30, 2023
d63a6c7
patchkernel: add tracking of interfaces during adaptation/partitioning
andrea-iob Jan 30, 2023
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5 changes: 5 additions & 0 deletions src/PABLO/LocalTree.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -524,6 +524,11 @@ namespace bitpit {
uint32_t firstChildIdx = futureIdx - (nChildren - 1);
fatherOctant.buildChildren(m_octants.data() + firstChildIdx);

// Set children information
for (int i = 0; i < nChildren; ++i) {
m_octants[firstChildIdx + i].m_info[Octant::INFO_NEW4REFINEMENT] = true;
}

// Update the mapping
if(!mapidx.empty()){
for (uint8_t i=0; i<nChildren; i++){
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2 changes: 0 additions & 2 deletions src/PABLO/Octant.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -844,8 +844,6 @@ void Octant::buildChildren(Octant *children) const {
uint32_t dh = oct.getLogicalSize();
oct.m_morton = PABLO::computeMorton(m_dim, coords[0] + dh * dx, coords[1] + dh * dy, coords[2] + dh * dz);

oct.m_info[OctantInfo::INFO_NEW4REFINEMENT] = true;

oct.m_info[INFO_BOUNDFACE0 + xf] = false;
oct.m_info[INFO_BOUNDFACE0 + yf] = false;
oct.m_info[INFO_BOUNDFACE0 + zf] = false;
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3 changes: 1 addition & 2 deletions src/containers/piercedKernel.tpp
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Expand Up @@ -1911,12 +1911,11 @@ void PiercedKernel<id_t>::holesClearPending(bool release)
template<typename id_t>
void PiercedKernel<id_t>::holesResize(std::size_t offset, std::size_t nRegulars, std::size_t nPendings, bool release)
{
m_holes.resize(offset + nRegulars + MAX_PENDING_HOLES);
if (release) {
m_holes.shrink_to_fit();
}

m_holes.resize(offset + nRegulars + MAX_PENDING_HOLES);

m_holes_regular_begin = offset;
m_holes_regular_end = m_holes_regular_begin + nRegulars;
m_holes_pending_begin = m_holes_regular_end;
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