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New version 0.24.0
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nunofonseca committed Jul 9, 2020
1 parent 9cb2274 commit c6deadd
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Showing 4 changed files with 7 additions and 3 deletions.
2 changes: 1 addition & 1 deletion Makefile
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@@ -1,4 +1,4 @@
VERSION=0.23.0
VERSION=0.24.0
# Requires zlib and samtools 0.1.9
all:
make -C src clean
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2 changes: 1 addition & 1 deletion sh/fastq2bam
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#!/bin/bash
# wrapper to fastq_pre_barcodes
# Generates a BAM file with unaligned reads and all barcodes preprocessed
VERSION="0.23.0"
VERSION="0.24.0"

command -v fastq_pre_barcodes >/dev/null 2>&1 || { echo "ERROR: fastq_utils does not seem to be installed - fastq_pre_barcodes not found. Aborting." >&2; exit 1; }
command -v samtools >/dev/null 2>&1 || { echo "ERROR: fastq_utils does not seem to be installed - samtools not found. Aborting." >&2; exit 1; }
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4 changes: 4 additions & 0 deletions src/Makefile
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Expand Up @@ -64,6 +64,10 @@ fastq_tests: fastq_tests.o hash.o fastq.o range_list.o
fastq_trim_poly_at: fastq_trim_poly_at.o hash.o fastq.o
gcc $(CFLAGS) $^ -lz -o $@

##fastq_trim_poly_at: fastq_sanger2phred.o hash.o fastq.o
## gcc $(CFLAGS) $^ -lz -o $@


fastq_pre_barcodes: fastq.o fastq.h fastq_pre_barcodes.o hash.o
gcc $(CFLAGS) $(patsubst %.h,,$^) -lz -o $@

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2 changes: 1 addition & 1 deletion src/fastq.h
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Expand Up @@ -20,7 +20,7 @@
#
# =========================================================
*/
#define VERSION "0.23.0"
#define VERSION "0.24.0"

#define DEFAULT 0
#define CASAVA18 1
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