Update vsc_kul_uhasselt.conf -- Dynamically adjust account based on queue type #822
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Merge with main
ljwharbers
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Joon-Klaps
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Jan 10, 2025
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You recently added the dedicated nodes as possible partitions. However, since there is only
$SLURM_ACCOUNTis used as the--account. Nextflow submissions will fail because the dedicated nodes have different--accountrequirements.This PR has changes to dynamically evaluate whether the outcome of the queue variable is one of the dedicated nodes and will give change the
--accountcluster option based on this. Another option is to have users specify multiple environment variables and call these instead of the hardcoded--accountin clusterOptions like I have done now.Since there are issues with evaluating
queue, I repeated the queue definition statement. It's a bit ugly so if you have other suggestions, feel free.I have only tested this config for the dedicated vs non-dedicated CPU nodes, not for the gpu or the gpu_h100.