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Export TreeSummarizedExperiment R object #1560

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Export TreeSummarizedExperiment R object

Export TreeSummarizedExperiment R object #1560

Triggered via pull request December 20, 2024 14:54
@d4straubd4straub
synchronize #807
d4straub:TreeSummarizedExperiment
Status Cancelled
Total duration 15m 9s
Artifacts –

ci.yml

on: pull_request
Matrix: nf-test
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63 errors and 40 warnings
nf-test (latest-everything, docker, test_pacbio_its, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_pacbio_its, false)
Process completed with exit code 1.
nf-test (latest-everything, docker, test_pacbio_its, false)
Process completed with exit code 1.
nf-test (24.04.2, docker, test_pacbio_its, false)
Process completed with exit code 1.
nf-test (24.04.2, docker, test_pacbio_its, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_pacbio_its, false)
Process completed with exit code 1.
nf-test (latest-everything, docker, test_fasta, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_fasta, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_novaseq, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_iontorrent, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_iontorrent, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_novaseq, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_single, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_single, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_qiimecustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_qiimecustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_reftaxcustom, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test_reftaxcustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_multiregion, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test_multiregion, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_multiregion, false)
The operation was canceled.
nf-test (24.04.2, docker, test_multiregion, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test_multiregion, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_multiregion, false)
The operation was canceled.
nf-test (latest-everything, docker, test_failed, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test_failed, false)
The operation was canceled.
nf-test (latest-everything, docker, test_failed, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_pplace, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test_pplace, false)
The operation was canceled.
nf-test (24.04.2, docker, test_pplace, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_multi, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test_multi, false)
The operation was canceled.
nf-test (latest-everything, docker, test_multi, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_reftaxcustom, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test_reftaxcustom, false)
The operation was canceled.
nf-test (24.04.2, docker, test, false)
The operation was canceled.
nf-test (24.04.2, docker, test_reftaxcustom, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test, false)
The operation was canceled.
nf-test (latest-everything, docker, test, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_pplace, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test_pplace, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_pplace, false)
The operation was canceled.
nf-test (latest-everything, docker, test_sintax, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test_sintax, false)
The operation was canceled.
nf-test (latest-everything, docker, test_sintax, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_failed, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test_failed, false)
The operation was canceled.
nf-test (24.04.2, docker, test_failed, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_doubleprimers, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (latest-everything, docker, test_doubleprimers, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (latest-everything, docker, test_doubleprimers, false)
The operation was canceled.
nf-test (24.04.2, docker, test_multi, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test_multi, false)
The operation was canceled.
nf-test (24.04.2, docker, test_multi, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_doubleprimers, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test_doubleprimers, false)
The operation was canceled.
nf-test (24.04.2, docker, test_doubleprimers, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_sintax, false)
Canceling since a higher priority waiting request for 'nf-core CI-807' exists
nf-test (24.04.2, docker, test_sintax, false)
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
nf-test (24.04.2, docker, test_sintax, false)
The operation was canceled.
nf-test (latest-everything, docker, test_pacbio_its, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (latest-everything, docker, test_pacbio_its, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_pacbio_its, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (24.04.2, docker, test_pacbio_its, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_fasta, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (latest-everything, docker, test_fasta, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_fasta, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (24.04.2, docker, test_fasta, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_novaseq, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (latest-everything, docker, test_novaseq, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_iontorrent, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (latest-everything, docker, test_iontorrent, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_iontorrent, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (24.04.2, docker, test_iontorrent, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_novaseq, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (24.04.2, docker, test_novaseq, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_single, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (latest-everything, docker, test_single, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_single, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (24.04.2, docker, test_single, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_qiimecustom, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (24.04.2, docker, test_qiimecustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_qiimecustom, false)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
nf-test (latest-everything, docker, test_qiimecustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_reftaxcustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_multiregion, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_multiregion, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_failed, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_pplace, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_multi, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_reftaxcustom, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_pplace, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_sintax, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_failed, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (latest-everything, docker, test_doubleprimers, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_multi, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_doubleprimers, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
nf-test (24.04.2, docker, test_sintax, false)
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23