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Correct link to Nextstrain documentation [#1133]
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genehack committed Aug 9, 2024
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2 changes: 1 addition & 1 deletion docs/src/reference/remote_inputs.rst
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Expand Up @@ -27,7 +27,7 @@ Entire metadata & sequences data is uploaded from the ``ncov-ingest`` workflows
- ``metadata.tsv.zst`` and ``metadata.tsv.gz``
- ``sequences.fasta.zst`` and ``sequences.fasta.xz``
- ``nextclade.tsv.zst`` and ``nextclade.tsv.gz``
- ``aligned.fasta.zst`` and ``aligned.fasta.xz`` (Alignment via `Nextclade <https://docs.nextstrain.org/projects/nextclade/en/stable/user/output-files.html#aligned-nucleotide-sequences>`__. The default reference genome is `MN908947 <https://www.ncbi.nlm.nih.gov/nuccore/MN908947>`__ (Wuhan-Hu-1))
- ``aligned.fasta.zst`` and ``aligned.fasta.xz`` (Alignment via `Nextclade <https://docs.nextstrain.org/projects/nextclade/en/stable/user/output-files/02-nuc-alignment.html>`__. The default reference genome is `MN908947 <https://www.ncbi.nlm.nih.gov/nuccore/MN908947>`__ (Wuhan-Hu-1))
- ``additional_info.tsv.zst`` and ``additional_info.tsv.gz`` (GISAID only)
- ``flagged_metadata.txt.zst`` and ``flagged_metadata.txt.gz`` (GISAID only)

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