deleting files from previous wildcard attempt

nextstrain · Apr 23, 2024 · d9a9cd2 · d9a9cd2
1 parent 6cc834e
commit d9a9cd2
Show file tree

Hide file tree

Showing 33 changed files with 42 additions and 1,959 deletions.
diff --git a/Snakefile b/Snakefile
@@ -18,7 +18,7 @@ rule all:
 rule files:
     params:
         dropped_strains = "config/dropped_strains_{subtype}.txt",
-        include_strains = "config/include_strains_{subtype}.txt",
+        include_strains = "config/include_strains_{subtype}_{time}.txt",
         reference = "config/reference_{subtype}_{segment}.gb",
         colors = "config/colors_{subtype}.tsv",
         lat_longs = "config/lat_longs_{subtype}.tsv",

diff --git a/config/auspice_config_h5nx-2-year.json b/config/auspice_config_h5nx-2-year.json
diff --git a/config/auspice_config_h5nx-all-time.json b/config/auspice_config_h5nx-all-time.json
diff --git a/config/colors_h5nx-2-year.tsv b/config/colors_h5nx-2-year.tsv