Use Rbiom unifrac implementation instead of runUnifrac #102
thpralAnnotations
11 errors and 12 warnings
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ubuntu-latest (auto)
Process completed with exit code 1.
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windows-latest (auto)
there is no package called 'rbiom'
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windows-latest (auto)
there is no package called 'rbiom'
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windows-latest (auto)
R CMD check found ERRORs
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windows-latest (auto)
Test failures
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windows-latest (auto)
Process completed with exit code 1.
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macOS-latest (auto)
there is no package called ‘rbiom’
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macOS-latest (auto)
there is no package called ‘rbiom’
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macOS-latest (auto)
R CMD check found ERRORs
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macOS-latest (auto)
Test failures
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macOS-latest (auto)
Process completed with exit code 1.
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ubuntu-latest (auto)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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ubuntu-latest (auto)
Unexpected input(s) 'enable_act', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
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ubuntu-latest (auto)
Unexpected input(s) 'enable_act', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
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windows-latest (auto)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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windows-latest (auto)
Unexpected input(s) 'enable_act', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
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windows-latest (auto)
Unexpected input(s) 'enable_act', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
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macOS-latest (auto)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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macOS-latest (auto)
Unexpected input(s) 'enable_act', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
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macOS-latest (auto)
Unexpected input(s) 'enable_act', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
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macOS-latest (auto)
Failed to download action 'https://api.github.com/repos/docker/build-push-action/tarball/3e7a4f6646880c6f63758d73ac32392d323eaf8f'. Error: The SSL connection could not be established, see inner exception.
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macOS-latest (auto)
Back off 17.73 seconds before retry.
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Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-devel-r-auto-results", "Windows-biocversion-devel-r-auto-results".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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Artifacts
Produced during runtime
| Name | Size | |
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Linux-biocversion-devel-r-auto-results
Expired
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9.11 MB |
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Windows-biocversion-devel-r-auto-results
Expired
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9.15 MB |
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macOS-biocversion-devel-r-auto-results
Expired
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9.1 MB |
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