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Abundance classification #1146

Abundance classification

Abundance classification #1146

Triggered via pull request January 17, 2025 09:51
@TuomasBormanTuomasBorman
synchronize #664
crt_prt
Status Failure
Total duration 18m 48s
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rworkflows.yml

on: pull_request
Matrix: rworkflows
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17 errors and 19 warnings
ubuntu-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
ubuntu-latest (auto)
[Workflow Telemetry] Unable to report stat collector result
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
windows-latest (auto)
Failed to install 'mia' from local:
windows-latest (auto)
Process completed with exit code 1.
windows-latest (auto)
Failed to install 'mia' from local:
windows-latest (auto)
Process completed with exit code 1.
macOS-latest (auto)
No such keg: /opt/homebrew/Cellar/[email protected]
macOS-latest (auto)
Failed to install 'mia' from local:
macOS-latest (auto)
Process completed with exit code 1.
macOS-latest (auto)
Failed to install 'mia' from local:
macOS-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (auto)
newline within quoted string at getAbundant.Rd:95
windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/Rtmp25poRt/Rbuild18a056dc218/mia/man/getAbundant.Rd:97: unexpected section header '\value'
windows-latest (auto)
newline within quoted string at getAbundant.Rd:95
windows-latest (auto)
newline within quoted string at getAbundant.Rd:95
windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/RtmpUrdYCS/Rbuild9c86b08da3/mia/man/getAbundant.Rd:97: unexpected section header '\value'
windows-latest (auto)
newline within quoted string at getAbundant.Rd:95
windows-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (auto)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (auto)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
harfbuzz 10.2.0 is already installed and up-to-date. To reinstall 10.2.0, run: brew reinstall harfbuzz
macOS-latest (auto)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (auto)
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5: