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  1. Redcarpet Redcarpet Public

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  2. CURED CURED Public

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  3. DAMAGE DAMAGE Public

    Diagnostic Allele Method for Actionable Genomic Epidemiology

  4. THRESHER THRESHER Public

    THRESHER is a pipeline designed to implement dynamic and unbiased SNP thresholds, corrected for phylogenetic structures, to determine strain compositions and identify transmission clusters..

    R

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  • THRESHER Public

    THRESHER is a pipeline designed to implement dynamic and unbiased SNP thresholds, corrected for phylogenetic structures, to determine strain compositions and identify transmission clusters..

    microbialARC/THRESHER’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jan 28, 2025
  • DAMAGE Public

    Diagnostic Allele Method for Actionable Genomic Epidemiology

    microbialARC/DAMAGE’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Jan 24, 2025
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    microbialARC/CURED’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 10, 2024
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    microbialARC/Redcarpet’s past year of commit activity
    0 GPL-3.0 1 0 0 Updated Feb 10, 2024

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