add pysam dependency #27
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name: dev ci | |
on: | |
pull_request: | |
push: | |
branches: | |
- main | |
- other-branch | |
workflow_dispatch: | |
jobs: | |
test: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.11.3" | |
- name: Install Python package | |
run: python -m pip install .[test] | |
- name: Run tests | |
run: python -m pytest | |
matrix-test: | |
strategy: | |
matrix: | |
os: [ubuntu-latest] | |
python-version: ["3.9", "3.11"] | |
include: | |
- os: macos-latest | |
python-version: "3.10" | |
runs-on: ${{ matrix.os }} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install Python package | |
run: python -m pip install .[test] | |
- name: Run tests | |
run: python -m pytest | |
- name: Example step that runs on Linux | |
if: runner.os == 'Linux' | |
run: echo "Found Linux system" |