This integrated tool aims to take input histopathology WSIs for breast cancer (.svs format), identifies coordinates of mitotic figures using two-stage CNN and produces mitotic grading using agglomerative clustering (for the default 10 high power field standard).
All data, training libraries and segmentation methodologies come from:
- Bertram, C. A., Aubreville, M., Marzahl, C., Maier, A., & Klopfleisch, R. (2019). A large-scale dataset for mitotic figure assessment on whole slide images of canine cutaneous mast cell tumor. Scientific Data, 6(274), 1--9.