updating make modes and targets for clarity

lotusnprod · Dec 23, 2021 · 6595d88 · 6595d88
1 parent 11c2be0
commit 6595d88
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Showing 4 changed files with 4 additions and 4 deletions.
diff --git a/...ganism/shell/gnverifierLauncher_manual.sh → ...ganism/shell/gnverifierLauncher_custom.sh b/...ganism/shell/gnverifierLauncher_manual.sh → ...ganism/shell/gnverifierLauncher_custom.sh
@@ -5,4 +5,4 @@
 
 source 2_curating/2_editing/organism/shell/gnverifier.sh
 
-gnverifier ../data/interim/tables_manual/2_processed/organism/verify.tsv.gz ../data/interim/tables_manual/2_processed/organism/verified.json
+gnverifier ../data/interim/tables_custom/2_processed/organism/verify.tsv.gz ../data/interim/tables_custom/2_processed/organism/verified.json
diff --git a/.../shell/originalGnfinderLauncher_manual.sh → .../shell/originalGnfinderLauncher_custom.sh b/.../shell/originalGnfinderLauncher_manual.sh → .../shell/originalGnfinderLauncher_custom.sh
@@ -5,4 +5,4 @@
 
 source 2_curating/2_editing/organism/shell/gnfinder.sh
 
-gnfinder ../data/interim/tables_manual/0_original/organism ../data/interim/tables_manual/2_processed/organism/original
+gnfinder ../data/interim/tables_custom/0_original/organism ../data/interim/tables_custom/2_processed/organism/original
diff --git a/...hell/originalGnverifierLauncher_manual.sh → ...hell/originalGnverifierLauncher_custom.sh b/...hell/originalGnverifierLauncher_manual.sh → ...hell/originalGnverifierLauncher_custom.sh
@@ -5,4 +5,4 @@
 
 source 2_curating/2_editing/organism/shell/gnverifier_capital.sh
 
-gnverifier_capital ../data/interim/tables_manual/0_original/organism/original.tsv.gz ../data/interim/tables_manual/2_processed/organism/original_verified.json
+gnverifier_capital ../data/interim/tables_custom/0_original/organism/original.tsv.gz ../data/interim/tables_custom/2_processed/organism/original_verified.json
diff --git a/...hell/translatedGnfinderLauncher_manual.sh → ...hell/translatedGnfinderLauncher_custom.sh b/...hell/translatedGnfinderLauncher_manual.sh → ...hell/translatedGnfinderLauncher_custom.sh
@@ -5,4 +5,4 @@
 
 source 2_curating/2_editing/organism/shell/gnfinder.sh
 
-gnfinder ../data/interim/tables_manual/1_translated/organism ../data/interim/tables_manual/2_processed/organism/translated
+gnfinder ../data/interim/tables_custom/1_translated/organism ../data/interim/tables_custom/2_processed/organism/translated
Original file line number	Diff line number	Diff line change
Expand Up		@@ -5,4 +5,4 @@

		source 2_curating/2_editing/organism/shell/gnverifier.sh

		gnverifier ../data/interim/tables_manual/2_processed/organism/verify.tsv.gz ../data/interim/tables_manual/2_processed/organism/verified.json
		gnverifier ../data/interim/tables_custom/2_processed/organism/verify.tsv.gz ../data/interim/tables_custom/2_processed/organism/verified.json