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Paulocracy committed Jan 17, 2020
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## General Description

AutoPACMEN allows one to apply the sMOMENT method of automatically expanding a stoichiometric metabolic
model with protein allocation constraints (Bekiaris & Klamt, in submission).
model with protein allocation constraints ([Bekiaris & Klamt, 2020](#AutoPACMEN's-Publication)).
AutoPACMEN consists of 2 parts:
1) A Python 3 Model Generator which primarily uses [cobrapy](https://github.com/opencobra/cobrapy) and which applies the sMOMENT
method on a stoichiometric metabolic model.
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## AutoPACMEN's Publication

* Bekiaris PS & Klamt S; "Automatic Construction of Metabolic Models with Enzyme Constraints"; in submission
* Bekiaris, P.S., Klamt, S. Automatic construction of metabolic models with enzyme constraints. <i>BMC Bioinformatics</i> <b>21</b>, 19 (2020). [https://doi.org/10.1186/s12859-019-3329-9](https://doi.org/10.1186/s12859-019-3329-9)

## License

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