Make it executable

ottrpal/Dockerfile

@@ -1,12 +1,10 @@
-FROM jhudsl/base_ottr
+FROM jhudsl/base_ottr:dev
 LABEL maintainer="[email protected]"
 
-RUN installGithub.r \
-  jhudsl/ottrpal \
-  jhudsl/cow
+WORKDIR /app
 
+COPY entrypoint.sh .
 
-ARG CHECK_TYPE
-ENV CHECK_TYPE=${INPUT_CHECK_TYPE}
+RUN chmod +x entrypoint.sh
 
-ENTRYPOINT ["Rscript -e 'ottrpal::check(check_type == ${INPUT_CHECK_TYPE})'"]
+ENTRYPOINT ["/app/entrypoint.sh"]

ottrpal/entrypoint.sh

@@ -0,0 +1,8 @@
+#!/bin/sh
+
+Rscript -e "ottrpal::ottr_check(check_type = '$1', path = '$2')"
+
+# Save output
+echo "error_name=$error_name" >> $GITHUB_OUTPUT
+echo "report_path=$report_path" >> $GITHUB_OUTPUT
+echo "chk_results=$chk_results" >> $GITHUB_OUTPUT