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Florabank query #49

Merged
merged 21 commits into from
Jul 3, 2019
Merged

Florabank query #49

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c394dfc
Add glue and stringr to description file
hansvancalster Jun 11, 2019
a294a8c
Add three functions to query florabank
hansvancalster Jun 11, 2019
a2e5e4b
Update NAMESPACE
hansvancalster Jun 12, 2019
269f186
Add documentation for the functions
hansvancalster Jun 12, 2019
1e13365
Add rlang .data to avoid unknown variable notes
hansvancalster Jun 12, 2019
168e608
Add connection parameter to functions
hansvancalster Jun 14, 2019
95f22e9
Update namespace
hansvancalster Jun 14, 2019
e92e498
Update documentation
hansvancalster Jun 14, 2019
c9f25d1
Use collect = FALSE as default
hansvancalster Jun 18, 2019
a563434
Code clean-up
hansvancalster Jun 18, 2019
172113e
Put common sql part in object
hansvancalster Jun 18, 2019
530b4b9
Rename begin_year to starting_year
hansvancalster Jun 18, 2019
bf087f1
Fix several problems
hansvancalster Jun 19, 2019
276e00d
Add %LIKE% as global variable
hansvancalster Jun 19, 2019
077ec5f
Update namespace and documentation
hansvancalster Jun 19, 2019
7984c60
Update R/florabank_queries.R
hansvancalster Jun 24, 2019
f849244
Use tbl() instead of dbGetQuery() for all functions
hansvancalster Jun 24, 2019
18dd32b
Update namespace and documentation
hansvancalster Jun 24, 2019
0c4ab1e
Update pkgdown yaml
hansvancalster Jun 28, 2019
566b8c4
Comply with GDPR
hansvancalster Jul 3, 2019
f7339d8
Add florabank tag and use this in _pkgdown.yml
hansvancalster Jul 3, 2019
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2 changes: 2 additions & 0 deletions DESCRIPTION
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Original file line number Diff line number Diff line change
Expand Up @@ -20,6 +20,7 @@ Imports:
assertthat,
DBI,
dplyr,
glue,
httr,
iterators,
lazyeval,
Expand All @@ -36,6 +37,7 @@ Imports:
sp,
sf,
stats,
stringr,
tibble,
tidyr,
tidyselect
Expand Down
18 changes: 18 additions & 0 deletions NAMESPACE
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Expand Up @@ -7,6 +7,9 @@ export(connect_inbo_dbase)
export(csv_to_sqlite)
export(df_factors_to_char)
export(download_knmi_data_hour)
export(florabank_observations)
export(florabank_taxon_ifbl_year)
export(florabank_traits)
export(gbif_species_name_match)
export(guess_projection)
export(plot_coordinates_on_map)
Expand All @@ -32,16 +35,30 @@ importFrom(assertthat,is.string)
importFrom(assertthat,noNA)
importFrom(dplyr,"%>%")
importFrom(dplyr,bind_cols)
importFrom(dplyr,collect)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,funs)
importFrom(dplyr,group_by)
importFrom(dplyr,inner_join)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_)
importFrom(dplyr,mutate_at)
importFrom(dplyr,mutate_each_)
importFrom(dplyr,n)
importFrom(dplyr,pull)
importFrom(dplyr,quo)
importFrom(dplyr,rename)
importFrom(dplyr,sample_n)
importFrom(dplyr,select)
importFrom(dplyr,select_)
importFrom(dplyr,select_if)
importFrom(dplyr,summarize)
importFrom(dplyr,tbl)
importFrom(dplyr,tbl_df)
importFrom(dplyr,ungroup)
importFrom(glue,glue_sql)
importFrom(httr,POST)
importFrom(httr,content)
importFrom(iterators,ireadLines)
Expand Down Expand Up @@ -99,6 +116,7 @@ importFrom(stats,cov2cor)
importFrom(stats,lm)
importFrom(stats,model.matrix)
importFrom(stats,vcov)
importFrom(stringr,str_sub)
importFrom(tibble,as_tibble)
importFrom(tidyr,extract)
importFrom(tidyr,separate)
Expand Down
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