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河南大学卢福浩课题组软件安装脚本

为进一步简化Linux软件编译及安装方法,特设立此GitHub仓库

一般只需要直接运行程序,即可成功编译安装所需要的生物信息学软件


准备工作

在你的~/.bashrc里面添加如下行

export PROGPATH=${HOME}/Programs

export BIODATABASES=${HOME}/Databases

其中,${HOME}/Programs为软件安装位置,可自行更改,此仓库的脚本都会默认安装到此目录下

${HOME}/Databases为数据库位置,可自行更改,数据库会安装到此位置

新软件的安装/编译问题

请到Issue下面提出问题


Routine libraries

sudo apt-get install libbz2-dev libtbb-dev zlib1g-dev

Bowtie

libtbb-dev

GMAP/GSNAP

zlib bzip2


Author:

Fu-Hao Lu

Professor, PhD

State Key Labortory of Crop Stress Adaptation and Improvement

College of Life Science

Jinming Campus, Henan University

Kaifeng 475004, P.R.China

E-mail: [email protected]

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