Fixed photon overflow corrections

harripd · Jun 20, 2024 · 6c60bf4 · 6c60bf4
1 parent 16a1e37
commit 6c60bf4
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Showing 4 changed files with 566 additions and 120 deletions.
diff --git a/notebooks/Convert PicoQuant ns-ALEX files to Photon-HDF5.ipynb b/notebooks/Convert PicoQuant ns-ALEX files to Photon-HDF5.ipynb
@@ -239,20 +239,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "## 3.1 Filtering photons\n",
-    "\n",
-    "Most photons are the detector 127, we can filter them out to save space:"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "valid = detectors != 127\n",
-    "for field in ('detectors', 'timestamps', 'nanotimes'):\n",
-    "    d['photon_data'][field] = d['photon_data'][field][valid]"
+    "## 3.1 Check all photons in ascending order"
    ]
   },
   {
@@ -547,7 +534,7 @@
    "name": "py36"
   },
   "kernelspec": {
-   "display_name": "Python 3",
+   "display_name": "Python 3 (ipykernel)",
    "language": "python",
    "name": "python3"
   },
@@ -561,7 +548,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.7"
+   "version": "3.12.3"
   },
   "nteract": {
    "version": "0.12.3"
@@ -578,5 +565,5 @@
   }
  },
  "nbformat": 4,
- "nbformat_minor": 1
+ "nbformat_minor": 4
 }