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Update readme to fix link.
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kishwarshafin authored and copybara-github committed Nov 2, 2023
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Expand Up @@ -20,17 +20,18 @@ DeepVariant supports germline variant-calling in diploid organisms.
[PacBio case study](docs/deepvariant-pacbio-model-case-study.md).
* Oxford Nanopore R10.4.1 Simplex or Duplex data, see the
[ONT R10.4.1 Simplex case study](docs/deepvariant-ont-r104-simplex-case-study.md)
and [ONT R10.4.1 Duplex case study](docs/deepvariant-ont-r104-duplex-case-study.md).
and
[ONT R10.4.1 Duplex case study](docs/deepvariant-ont-r104-duplex-case-study.md).
* Hybrid PacBio HiFi + Illumina WGS, see the
[hybrid case study](docs/deepvariant-hybrid-case-study.md).
* Oxford Nanopore R9.4.1 data by using
[PEPPER-DeepVariant](https://github.com/kishwarshafin/pepper).
* To map using a pangenome to improve accuracy, use this [vg case study]
(docs/deepvariant-vg-case-study.md).
* Complete Genomics data: [T7 case study](docs/deepvariant-complete-t7-case-study.md);
* To map using a pangenome to improve accuracy, use this
[vg case study](docs/deepvariant-vg-case-study.md).
* Complete Genomics data:
[T7 case study](docs/deepvariant-complete-t7-case-study.md);
[G400 case study](docs/deepvariant-complete-g400-case-study.md)


Please also note:

* For somatic data or any other samples where the genotypes go beyond two
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