WIP: debug e2e

genialis · Jun 13, 2024 · 196be1c · 196be1c
1 parent f8e2581
commit 196be1c
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diff --git a/docs/files/start.py b/docs/files/start.py
@@ -20,6 +20,9 @@
 # All paired-end fastq objects
 res.data.filter(type='data:reads:fastq:paired')
 
+print("All data objects")
+print(res.data.all())
+
 # Get specific object by slug
 reads = res.data.get('resdk-example-reads')
 

diff --git a/tests/functional/docs/e2e_docs.py b/tests/functional/docs/e2e_docs.py
@@ -71,6 +71,7 @@ def run_tutorial_script(self, script_name, replace_lines=None):
             exec("".join(content))
 
     def upload_reads(self, res):
+        print("Uploading reads")
         reads = res.run(
             slug="upload-fastq-single",
             input={"src": os.path.join(TEST_FILES_DIR, "reads.fastq.gz")},
@@ -79,6 +80,10 @@ def upload_reads(self, res):
         self.set_slug(reads, self.reads_slug)
         self.set_slug(reads.sample, self.sample_slug)
 
+        print("Uploaded reads")
+        print(reads)
+        print("All data")
+        print(res.data.all())
         return reads
 
     def upload_genome(self, res, fasta, slug):