a little cleaning before heading into #82

Makefile

@@ -9,7 +9,7 @@ TEST_SRCS ?= sgd pombase
 #SRCS ?= sgd pombase mgi zfin rgd dictybase fb tair wb goa_human goa_human_complex goa_human_rna goa_human_isoform goa_pig xenbase pseudocap uniprot_reviewed_virus_bacteria
 #SRCS ?= sgd pombase mgi zfin rgd dictybase fb tair wb goa_human goa_human_complex goa_human_rna goa_human_isoform goa_pig xenbase pseudocap ecocyc
 #SRCS ?= uniprot_reviewed
-SRCS ?= sgd pombase mgi zfin rgd dictybase fb tair wb goa_human goa_human_complex goa_human_rna goa_human_isoform goa_pig xenbase pseudocap ecocyc uniprot_reviewed
+SRCS ?= sgd pombase mgi zfin rgd dictybase fb tair wb goa_human goa_human_complex goa_human_rna goa_human_isoform goa_pig xenbase pseudocap ecocyc goa_sars-cov-2 uniprot_reviewed
 
 OBO_SRCS = $(patsubst %,target/neo-%.obo,$(SRCS))
 all_obo: $(OBO_SRCS)
@@ -47,13 +47,13 @@ mirror/goa_sars-cov-2.gpi.gz:
 target/neo-goa_sars-cov-2.obo: mirror/goa_sars-cov-2.gpi.gz
 	gzip -dc $< | ./gpi2obo.pl -s Scov2 -n sars-cov-2 > $@.tmp && mv $@.tmp $@
 
-## In support of including viruses and bacteria
-## (https://github.com/geneontology/neo/issues/77).
-## http://ftp.ebi.ac.uk/pub/contrib/goa/uniprot_reviewed_virus_bacteria.gpi.gz
-mirror/uniprot_reviewed_virus_bacteria.gpi.gz:
-	wget --no-check-certificate http://ftp.ebi.ac.uk/pub/contrib/goa/uniprot_reviewed_virus_bacteria.gpi.gz -O mirror/uniprot_reviewed_virus_bacteria.gpi.gz
-target/neo-uniprot_reviewed_virus_bacteria.obo: mirror/uniprot_reviewed_virus_bacteria.gpi.gz
-	gzip -dc $< | ./gpi2obo.pl -F -n reviewed_virus_bacteria > $@.tmp && mv $@.tmp $@
+# ## In support of including viruses and bacteria
+# ## (https://github.com/geneontology/neo/issues/77).
+# ## http://ftp.ebi.ac.uk/pub/contrib/goa/uniprot_reviewed_virus_bacteria.gpi.gz
+# mirror/uniprot_reviewed_virus_bacteria.gpi.gz:
+# 	wget --no-check-certificate http://ftp.ebi.ac.uk/pub/contrib/goa/uniprot_reviewed_virus_bacteria.gpi.gz -O mirror/uniprot_reviewed_virus_bacteria.gpi.gz
+# target/neo-uniprot_reviewed_virus_bacteria.obo: mirror/uniprot_reviewed_virus_bacteria.gpi.gz
+# 	gzip -dc $< | ./gpi2obo.pl -F -n reviewed_virus_bacteria > [email protected] && mv [email protected] $@
 
 ## In support of including all swissprot reviewed.
 ## (https://github.com/geneontology/neo/issues/82).