Skip to content

Commit

Permalink
Built site for gh-pages
Browse files Browse the repository at this point in the history
  • Loading branch information
stineb committed Dec 5, 2024
1 parent 329c683 commit d90e037
Show file tree
Hide file tree
Showing 27 changed files with 298 additions and 41 deletions.
2 changes: 1 addition & 1 deletion .nojekyll
Original file line number Diff line number Diff line change
@@ -1 +1 @@
f5a464c4
e154836e
2 changes: 1 addition & 1 deletion biogeography.html
Original file line number Diff line number Diff line change
Expand Up @@ -308,7 +308,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion ecohydrology.html
Original file line number Diff line number Diff line change
Expand Up @@ -308,7 +308,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion ecosystemcarbon.html
Original file line number Diff line number Diff line change
Expand Up @@ -308,7 +308,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion feedbacks.html
Original file line number Diff line number Diff line change
Expand Up @@ -274,7 +274,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion ghg.html
Original file line number Diff line number Diff line change
Expand Up @@ -274,7 +274,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion globalcarbonbudget.html
Original file line number Diff line number Diff line change
Expand Up @@ -308,7 +308,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion globalcarbonpatterns.html
Original file line number Diff line number Diff line change
Expand Up @@ -308,7 +308,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
4 changes: 2 additions & 2 deletions globenvchange.html
Original file line number Diff line number Diff line change
Expand Up @@ -272,7 +272,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down Expand Up @@ -1276,7 +1276,7 @@ <h3 data-number="13.2.7" class="anchored" data-anchor-id="measurements-of-co2-fe
</div>
<div class="nav-page nav-page-next">
<a href="./oceancarbon.html" class="pagination-link">
<span class="nav-page-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span> <i class="bi bi-arrow-right-short"></i>
<span class="nav-page-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span> <i class="bi bi-arrow-right-short"></i>
</a>
</div>
</nav>
Expand Down
10 changes: 5 additions & 5 deletions gpp.html
Original file line number Diff line number Diff line change
Expand Up @@ -308,7 +308,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down Expand Up @@ -621,7 +621,7 @@ <h3 data-number="4.3.5" class="anchored" data-anchor-id="sec-fvcb"><span class="
\tag{4.9}\]</span></span> The electron transport rate <span class="math inline">\(J\)</span> is described by a saturating function that increases with absorbed light <span class="math inline">\(I_\mathrm{abs}\)</span> up to a maximum rate <span class="math inline">\(J_\mathrm{max}\)</span> <span id="eq-jmaxlim"><span class="math display">\[
J = \frac{4\varphi_0 I_\mathrm{abs}}{\sqrt{1+\left(\frac{4\varphi_0 I_\mathrm{abs}}{J_\mathrm{max}}\right)^2}}
\tag{4.10}\]</span></span></p>
<p>Together, <a href="#eq-ac">Equation&nbsp;<span>4.8</span></a> and <a href="#eq-aj">Equation&nbsp;<span>4.9</span></a> describe the combined effect of <span class="math inline">\(c_i\)</span>, (leaf) temperature, the absorbed photon flux density, and atmospheric pressure on leaf-level CO<sub>2</sub> assimilation.</p>
<p>Together, <a href="oceancarbon.html#eq-ac">Equation&nbsp;<span>14.5</span></a> and <a href="#eq-aj">Equation&nbsp;<span>4.9</span></a> describe the combined effect of <span class="math inline">\(c_i\)</span>, (leaf) temperature, the absorbed photon flux density, and atmospheric pressure on leaf-level CO<sub>2</sub> assimilation.</p>
<p>With the mathematical description of <span class="math inline">\(A_C\)</span> and <span class="math inline">\(A_J\)</span> and their dependency on light and CO<sub>2</sub> following the FvCB model, <em>A-c</em><sub>i</sub> and the <em>A</em> vs.&nbsp;PPFD curves, as shown for measurements in <a href="#fig-photosynthesis_light">Figure&nbsp;<span>4.5</span></a> and <a href="#fig-a-ci-curve">Figure&nbsp;<span>4.6</span></a>, can thereby be modeled.</p>
<div class="cell">
<details>
Expand Down Expand Up @@ -1358,19 +1358,19 @@ <h2 data-number="4.5" class="anchored" data-anchor-id="sec-constlue"><span class
<td><span class="math inline">\(V_\mathrm{cmax}\)</span></td>
<td>Maximum rate of Rubisco carboxylation</td>
<td>mol m<sup>-2</sup> s<sup>-1</sup></td>
<td><a href="#eq-ac">Equation&nbsp;<span>4.8</span></a></td>
<td><a href="oceancarbon.html#eq-ac">Equation&nbsp;<span>14.5</span></a></td>
</tr>
<tr class="odd">
<td><span class="math inline">\(K\)</span></td>
<td>Effective Michaelis-Menten coefficient for <span class="math inline">\(A_C\)</span></td>
<td>Pa</td>
<td><a href="#eq-ac">Equation&nbsp;<span>4.8</span></a></td>
<td><a href="oceancarbon.html#eq-ac">Equation&nbsp;<span>14.5</span></a></td>
</tr>
<tr class="even">
<td><span class="math inline">\(\Gamma^\ast\)</span></td>
<td>Photorespiratory compensation point</td>
<td>Pa</td>
<td><a href="#eq-ac">Equation&nbsp;<span>4.8</span></a></td>
<td><a href="oceancarbon.html#eq-ac">Equation&nbsp;<span>14.5</span></a></td>
</tr>
<tr class="odd">
<td><span class="math inline">\(J_\mathrm{max}\)</span></td>
Expand Down
Binary file added images/ocean_biological_pump.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added images/ocean_carbon_sink.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added images/ocean_carbonate_chemistry.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added images/ocean_circulation.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added images/ocean_dic_speciation.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added images/ocean_heatuptake.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added images/ocean_spatial_sink.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
2 changes: 1 addition & 1 deletion index.html
Original file line number Diff line number Diff line change
Expand Up @@ -283,7 +283,7 @@ <h1 class="title">Land in the Earth System</h1>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion intro.html
Original file line number Diff line number Diff line change
Expand Up @@ -274,7 +274,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion landclimate.html
Original file line number Diff line number Diff line change
Expand Up @@ -308,7 +308,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion landusechange.html
Original file line number Diff line number Diff line change
Expand Up @@ -274,7 +274,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
2 changes: 1 addition & 1 deletion nutrients.html
Original file line number Diff line number Diff line change
Expand Up @@ -274,7 +274,7 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./oceancarbon.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Ocean CO<sub>2</sub> uptake and emission-concentration trajectories</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">The Ocean and its CO<sub>2</sub> uptake</span></span></a>
</div>
</li>
</ul>
Expand Down
Loading

0 comments on commit d90e037

Please sign in to comment.