install biocmanager #208
Annotations
7 errors and 15 warnings
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Install dependencies pass 2
--- re-building ‘FRASER.Rnw’ using knitr
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Install dependencies pass 2
processing vignette 'FRASER.Rnw' failed with diagnostics:
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Install dependencies pass 2
non-finite value supplied by optim
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Install dependencies pass 2
Vignette re-building failed.
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Install dependencies pass 2
Failed to install 'FRASER' from local:
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Install dependencies pass 2
Process completed with exit code 1.
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Setup R from r-lib
No such keg: /opt/homebrew/Cellar/[email protected]
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Install macOS system dependencies
harfbuzz 10.1.0 is already installed and up-to-date.
To reinstall 10.1.0, run:
brew reinstall harfbuzz
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Install macOS system dependencies
fribidi 1.0.16 is already installed and up-to-date.
To reinstall 1.0.16, run:
brew reinstall fribidi
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Upload check results
No files were found with the provided path: check. No artifacts will be uploaded.
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Setup R from r-lib
pkgconf 2.3.0_1 is already installed and up-to-date.
To reinstall 2.3.0_1, run:
brew reinstall pkgconf
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Setup R from r-lib
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated
dependents or dependents with broken linkage!
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Install dependencies pass 1
Unused dummy argument ‘itry’ at (1) [-Wunused-dummy-argument]
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Install dependencies pass 1
Unused variable ‘t4’ declared at (1) [-Wunused-variable]
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Install dependencies pass 1
Unused variable ‘t5’ declared at (1) [-Wunused-variable]
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Install dependencies pass 1
‘t2’ may be used uninitialized [-Wmaybe-uninitialized]
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Install dependencies pass 1
‘i2’ may be used uninitialized [-Wmaybe-uninitialized]
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Install dependencies pass 1
Unused dummy argument ‘a’ at (1) [-Wunused-dummy-argument]
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Install dependencies pass 1
Unused variable ‘i’ declared at (1) [-Wunused-variable]
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Install dependencies pass 1
Unused dummy argument ‘idigit’ at (1) [-Wunused-dummy-argument]
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Install dependencies pass 1
Unused dummy argument ‘ifmt’ at (1) [-Wunused-dummy-argument]
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Install dependencies pass 1
Unused variable ‘j’ declared at (1) [-Wunused-variable]
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