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replace run_cmd with run_shell_cmd in custom easyblock for Perl (perl.py) #3161

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bartoldeman
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(created using eb --new-pr)

maxim-masterov and others added 24 commits August 16, 2023 12:20
- Handle missing package name by using folder name
- Fix handling of source with revision -> Output 4-tuple
Handling of 4-tuples `(crate, version, repo, rev)` removed parts of the
reponame as it expected a `.git` extension which is not always present.
Also the `source_urls` parameter is redundant as it won't be used.
…91636_new_pr_openssl_wrapper

also support OpenSSL 3 in OpenSSL wrapper easyblock
improve `generate_crate_list` + parsing of crates in `Cargo` easyblock
… order in PATH, rather than the newest version (which might be an OS python).
…election_policy

Apply CMake policy to select python based on PATH order, instead of highest version
Replace SLIP_LU with SPEX for SuiteSparse >= 6.0.
Indeed, .rstrip is better choice. Thanks for hint.
…w_pr_python

use correct TCL configure options for Python 3.11+
…ib64-upstream

pick Tcl/Tk lib directory correctly in R easyblock, may be either `lib` or `lib64`
remove trailing slash in `PETSC_DIR` set by custom easyblock for PETSc
Update MCR easy block for compatibility with v >= R2022b
…w_pr_vep

Install only selected species in VEP
@bartoldeman bartoldeman changed the base branch from develop to 5.0.x February 5, 2024 15:18
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wrong target branch :(

@bartoldeman bartoldeman closed this Feb 5, 2024
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9 participants