First commit Stage 2025

Custom_EasyBlocks/README.md

@@ -9,33 +9,26 @@ Overview of the custom EasyBlocks.
 - __*difference compared to upstream*__ the aforementioned parameter
 - __*can not be removed*__ at least until that option is merged upstream
 
-## CUDA
-
-- __*added by*__ s.achilles
-- __*needed because*__ the new easyblocks removes the stubs
-- __*difference compared to upstream*__ the aforementioned parameter
-- __*can not be removed*__ until we update to EB 4.8.1 which contains [PR #2793](https://github.com/easybuilders/easybuild-easyblocks/pull/2793)
-
 ## MPICH
 
 - __*added by*__ d.alvarez
 - __*needed because*__ optional `check_static_libs` parameter in the sanity check (used with `psmpi.py`)
 - __*difference compared to upstream*__ the aforementioned parameter
-- __*can not be removed*__ at least until that option (needed just for `psmpi.py`) is merged upstream (PR: #2787)
+- __*can not be removed*__ at least until that option (needed just for `psmpi.py`) is merged upstream (PR: [#2787](https://github.com/easybuilders/easybuild-easyblocks/pull/2787))
 
 ## PSMPI
 
 - __*added by*__ d.alvarez
-- __*needed because*__ CUDA support
-- __*difference compared to upstream*__ the supporting code to enable CUDA support
-- __*can not be removed*__ until the CUDA options are pushed upstream (PR: #2787)
+- __*needed because*__ MSA and PMIx support
+- __*difference compared to upstream*__ the supporting code to enable PMIx and MSA support
+- __*can not be removed*__ until these options are accepted upstream (PR: [#3383](https://github.com/easybuilders/easybuild-easyblocks/pull/3383))
 
 ## OPENMPI
 
 - __*added by*__ d.alvarez
 - __*needed because*__ the check for `mpirun` should be optional
 - __*difference compared to upstream*__ making that check optional
-- __*can not be removed*__ until the check is made optional upstream (PR: #2788)
+- __*can not be removed*__ until the check is made optional upstream (PR: [#2788](https://github.com/easybuilders/easybuild-easyblocks/pull/2788))
 
 ## CODE_SATURNE
 
@@ -55,44 +48,19 @@ Overview of the custom EasyBlocks.
 - __*needed because*__ it is the basic support for the MPI settings modules
 - __*can not be removed*__
 
-## SUITESPARSE
-
-- __*added by*__ d.alvarez
-- __*needed because*__ added CUDA-related tweaks not present in upstream
-- __*difference compared to upstream*__ the aforementioned
-- __*can not be removed*__ Once the PR is merged upstream. Hopefully with the next release
-
 ## JULIA
 
 - __*added by*__ j.goebbert
 - __*needed because*__ we offer more functionality compared to upstream
 - __*difference compared to upstream*__ upstream has not yet an EasyBlock for julia, juliabundle and juliapackage
 - __*can not be removed*__ once merged with upstream
 
-## VMD
-- __*added by*__ j.goebbert
-- __*needed because*__ we replaced the Mesa module by our own OpenGL module compared to upstream
-- __*difference compared to upstream*__ upstream checks for Mesa inside the easyblock
-- __*can not be removed*__ once upstream uses our OpenGL module
-
 ## GROMACS
 - __*added_by*__ j.meinke
 - __*needed because*__ want to use easyconfig parameters to determine CUDA capability.
 - __*difference compared to upstream*__ upstream doesn't have such a feature
 - __*can not be removed*__ until merged upstream
 
-## LAMMPS
-- __*added_by*__ d.alvarez
-- __*needed because*__ upstream does not include the changes that we used in the latest stage
-- __*difference compared to upstream*__ various, done by Alan
-- __*can not be removed*__ until merged upstream or the changes here are deprecated (need to be assesed by an expert)
-
-## NAMD
-- __*added_by*__ d.alvarez
-- __*needed because*__ need to disable CUDA support even if CUDA comes as a dependency
-- __*difference compared to upstream*__ upstream doesn't have such a feature
-- __*can not be removed*__ until merged upstream
-
 ## ELPA
 - __*added_by*__ d.alvarez
 - __*needed because*__ to autodetect CUDA and support CUDA compute capabilities